Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Cd74P04441 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Cd74P04441 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Cd74P04441 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Cd74P04441 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Cd74P04441 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.52■□□□□ 0.08
Cd74P04441 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cd74P04441 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cd74P04441 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Cd74P04441 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.52■□□□□ 0.07
Cd74P04441 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cd74P04441 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cd74P04441 Reep4-203ENSMUST00000226563 1444 ntBASIC15.51■□□□□ 0.07
Cd74P04441 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cd74P04441 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cd74P04441 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Cd74P04441 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cd74P04441 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15.51■□□□□ 0.07
Cd74P04441 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cd74P04441 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.51■□□□□ 0.07
Cd74P04441 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.51■□□□□ 0.07
Cd74P04441 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Cd74P04441 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cd74P04441 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.51■□□□□ 0.07
Cd74P04441 Gm10602-201ENSMUST00000098239 609 ntBASIC15.51■□□□□ 0.07
Cd74P04441 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cd74P04441 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cd74P04441 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cd74P04441 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Cd74P04441 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Cd74P04441 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cd74P04441 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.51■□□□□ 0.07
Cd74P04441 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cd74P04441 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cd74P04441 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cd74P04441 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cd74P04441 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cd74P04441 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cd74P04441 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cd74P04441 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Cd74P04441 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.5■□□□□ 0.07
Cd74P04441 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.5■□□□□ 0.07
Cd74P04441 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cd74P04441 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.5■□□□□ 0.07
Cd74P04441 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cd74P04441 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cd74P04441 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cd74P04441 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cd74P04441 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cd74P04441 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cd74P04441 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cd74P04441 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Cd74P04441 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cd74P04441 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cd74P04441 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Cd74P04441 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Cd74P04441 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cd74P04441 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cd74P04441 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cd74P04441 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cd74P04441 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cd74P04441 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cd74P04441 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cd74P04441 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cd74P04441 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cd74P04441 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cd74P04441 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cd74P04441 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cd74P04441 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.49■□□□□ 0.07
Cd74P04441 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cd74P04441 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cd74P04441 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cd74P04441 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Cd74P04441 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cd74P04441 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Cd74P04441 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cd74P04441 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cd74P04441 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Cd74P04441 Gm12933-201ENSMUST00000120203 872 ntBASIC15.48■□□□□ 0.07
Cd74P04441 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.48■□□□□ 0.07
Cd74P04441 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.48■□□□□ 0.07
Cd74P04441 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cd74P04441 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Cd74P04441 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.48■□□□□ 0.07
Cd74P04441 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Cd74P04441 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cd74P04441 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.47■□□□□ 0.07
Cd74P04441 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cd74P04441 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cd74P04441 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cd74P04441 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.47■□□□□ 0.07
Cd74P04441 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cd74P04441 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.47■□□□□ 0.07
Cd74P04441 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cd74P04441 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cd74P04441 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cd74P04441 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Cd74P04441 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cd74P04441 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.47■□□□□ 0.07
Cd74P04441 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms