Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04224 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04224 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.26■□□□□ 0.19
P04224 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P04224 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
P04224 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.25■□□□□ 0.19
P04224 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
P04224 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.25■□□□□ 0.19
P04224 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
P04224 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.25■□□□□ 0.19
P04224 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
P04224 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P04224 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.25■□□□□ 0.19
P04224 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P04224 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P04224 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P04224 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P04224 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P04224 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
P04224 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P04224 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P04224 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
P04224 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P04224 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P04224 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P04224 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P04224 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
P04224 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
P04224 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
P04224 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
P04224 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P04224 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
P04224 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
P04224 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P04224 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.24■□□□□ 0.19
P04224 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P04224 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P04224 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P04224 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P04224 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
P04224 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
P04224 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
P04224 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.23■□□□□ 0.19
P04224 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
P04224 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.23■□□□□ 0.19
P04224 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
P04224 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
P04224 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
P04224 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
P04224 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
P04224 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
P04224 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04224 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04224 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04224 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04224 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
P04224 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04224 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
P04224 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04224 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04224 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
P04224 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.22■□□□□ 0.19
P04224 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04224 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04224 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04224 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.22■□□□□ 0.19
P04224 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04224 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
P04224 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04224 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04224 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04224 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04224 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
P04224 AA386476-201ENSMUST00000098781 1665 ntBASIC16.21■□□□□ 0.19
P04224 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
P04224 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P04224 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
P04224 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
P04224 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
P04224 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
P04224 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P04224 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
P04224 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
P04224 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
P04224 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P04224 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P04224 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
P04224 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
P04224 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
P04224 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
P04224 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
P04224 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
P04224 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
P04224 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
P04224 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P04224 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P04224 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P04224 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
P04224 Gm15546-201ENSMUST00000122095 826 ntBASIC16.2■□□□□ 0.18
P04224 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms