Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Krt1P04104 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.58■□□□□ 0.41
Krt1P04104 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Krt1P04104 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
Krt1P04104 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.58■□□□□ 0.4
Krt1P04104 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Krt1P04104 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Krt1P04104 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Krt1P04104 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt1P04104 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt1P04104 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt1P04104 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt1P04104 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt1P04104 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.57■□□□□ 0.4
Krt1P04104 Gm9870-201ENSMUST00000063874 645 ntBASIC17.57■□□□□ 0.4
Krt1P04104 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Krt1P04104 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.57■□□□□ 0.4
Krt1P04104 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt1P04104 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Krt1P04104 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt1P04104 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Krt1P04104 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Krt1P04104 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Krt1P04104 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Krt1P04104 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt1P04104 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Krt1P04104 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.56■□□□□ 0.4
Krt1P04104 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Krt1P04104 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Krt1P04104 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt1P04104 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Krt1P04104 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt1P04104 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt1P04104 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt1P04104 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt1P04104 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt1P04104 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt1P04104 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.55■□□□□ 0.4
Krt1P04104 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt1P04104 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt1P04104 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt1P04104 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt1P04104 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt1P04104 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Krt1P04104 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.55■□□□□ 0.4
Krt1P04104 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt1P04104 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt1P04104 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt1P04104 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt1P04104 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
Krt1P04104 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Krt1P04104 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt1P04104 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt1P04104 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt1P04104 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt1P04104 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Krt1P04104 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Krt1P04104 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Krt1P04104 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt1P04104 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Krt1P04104 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt1P04104 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Krt1P04104 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt1P04104 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt1P04104 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt1P04104 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Krt1P04104 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.54■□□□□ 0.4
Krt1P04104 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt1P04104 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Krt1P04104 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Krt1P04104 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Krt1P04104 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Krt1P04104 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Krt1P04104 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Krt1P04104 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt1P04104 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt1P04104 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.53■□□□□ 0.4
Krt1P04104 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt1P04104 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt1P04104 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt1P04104 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt1P04104 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Krt1P04104 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.52■□□□□ 0.4
Krt1P04104 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Krt1P04104 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Krt1P04104 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.52■□□□□ 0.4
Krt1P04104 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Krt1P04104 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.52■□□□□ 0.4
Krt1P04104 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Krt1P04104 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Krt1P04104 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Krt1P04104 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Krt1P04104 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Krt1P04104 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Krt1P04104 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Krt1P04104 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Krt1P04104 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.52■□□□□ 0.39
Krt1P04104 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Krt1P04104 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Krt1P04104 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms