Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
P01788 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P01788 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
P01788 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
P01788 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
P01788 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
P01788 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P01788 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P01788 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P01788 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.62□□□□□ -0.07
P01788 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01788 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
P01788 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01788 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01788 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
P01788 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.62□□□□□ -0.07
P01788 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01788 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01788 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.62□□□□□ -0.07
P01788 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01788 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01788 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
P01788 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01788 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01788 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01788 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01788 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
P01788 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
P01788 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
P01788 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
P01788 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
P01788 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
P01788 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
P01788 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.61□□□□□ -0.07
P01788 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
P01788 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
P01788 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
P01788 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
P01788 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
P01788 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
P01788 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
P01788 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
P01788 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.6□□□□□ -0.07
P01788 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
P01788 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
P01788 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
P01788 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
P01788 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
P01788 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
P01788 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.6□□□□□ -0.07
P01788 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.6□□□□□ -0.07
P01788 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
P01788 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
P01788 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
P01788 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
P01788 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
P01788 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
P01788 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
P01788 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
P01788 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
P01788 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
P01788 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
P01788 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
P01788 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
P01788 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
P01788 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
P01788 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
P01788 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
P01788 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
P01788 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
P01788 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
P01788 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
P01788 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
P01788 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
P01788 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.59□□□□□ -0.07
P01788 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
P01788 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
P01788 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
P01788 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
P01788 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
P01788 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
P01788 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.58□□□□□ -0.08
P01788 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
P01788 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
P01788 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
P01788 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
P01788 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
P01788 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
P01788 Smad6-203ENSMUST00000179458 273 ntBASIC14.58□□□□□ -0.08
P01788 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.58□□□□□ -0.08
P01788 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
P01788 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
P01788 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
P01788 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
P01788 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
P01788 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
P01788 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
P01788 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
P01788 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
P01788 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms