Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hcn1O88704 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.69■□□□□ 0.42
Hcn1O88704 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hcn1O88704 Gm42569-201ENSMUST00000200539 472 ntBASIC17.69■□□□□ 0.42
Hcn1O88704 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Hcn1O88704 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hcn1O88704 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.69■□□□□ 0.42
Hcn1O88704 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hcn1O88704 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Hcn1O88704 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Hcn1O88704 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.68■□□□□ 0.42
Hcn1O88704 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hcn1O88704 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Hcn1O88704 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hcn1O88704 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Hcn1O88704 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hcn1O88704 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hcn1O88704 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hcn1O88704 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hcn1O88704 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hcn1O88704 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hcn1O88704 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Hcn1O88704 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hcn1O88704 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hcn1O88704 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hcn1O88704 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hcn1O88704 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.67■□□□□ 0.42
Hcn1O88704 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hcn1O88704 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hcn1O88704 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hcn1O88704 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hcn1O88704 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Hcn1O88704 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hcn1O88704 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hcn1O88704 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hcn1O88704 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hcn1O88704 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.67■□□□□ 0.42
Hcn1O88704 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hcn1O88704 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcn1O88704 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcn1O88704 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcn1O88704 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcn1O88704 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcn1O88704 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Hcn1O88704 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.66■□□□□ 0.42
Hcn1O88704 AV356131-201ENSMUST00000206201 750 ntBASIC17.66■□□□□ 0.42
Hcn1O88704 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcn1O88704 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcn1O88704 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcn1O88704 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hcn1O88704 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.66■□□□□ 0.42
Hcn1O88704 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcn1O88704 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcn1O88704 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hcn1O88704 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcn1O88704 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
Hcn1O88704 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcn1O88704 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hcn1O88704 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcn1O88704 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.65■□□□□ 0.42
Hcn1O88704 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.65■□□□□ 0.42
Hcn1O88704 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcn1O88704 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hcn1O88704 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Hcn1O88704 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Hcn1O88704 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.65■□□□□ 0.42
Hcn1O88704 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcn1O88704 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcn1O88704 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcn1O88704 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcn1O88704 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.65■□□□□ 0.42
Hcn1O88704 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hcn1O88704 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hcn1O88704 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.64■□□□□ 0.41
Hcn1O88704 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hcn1O88704 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hcn1O88704 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hcn1O88704 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.64■□□□□ 0.41
Hcn1O88704 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.64■□□□□ 0.41
Hcn1O88704 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hcn1O88704 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Hcn1O88704 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hcn1O88704 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.64■□□□□ 0.41
Hcn1O88704 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.64■□□□□ 0.41
Hcn1O88704 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hcn1O88704 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hcn1O88704 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.64■□□□□ 0.41
Hcn1O88704 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.64■□□□□ 0.41
Hcn1O88704 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hcn1O88704 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Hcn1O88704 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hcn1O88704 Gm38205-201ENSMUST00000192243 258 ntBASIC17.63■□□□□ 0.41
Hcn1O88704 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hcn1O88704 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.63■□□□□ 0.41
Hcn1O88704 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hcn1O88704 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hcn1O88704 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hcn1O88704 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hcn1O88704 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hcn1O88704 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms