Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Slc28a2O88627 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.46■□□□□ 0.23
Slc28a2O88627 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Slc28a2O88627 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Slc28a2O88627 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Slc28a2O88627 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Slc28a2O88627 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc28a2O88627 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc28a2O88627 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc28a2O88627 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc28a2O88627 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc28a2O88627 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Slc28a2O88627 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc28a2O88627 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc28a2O88627 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc28a2O88627 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc28a2O88627 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc28a2O88627 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc28a2O88627 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc28a2O88627 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc28a2O88627 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc28a2O88627 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc28a2O88627 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Slc28a2O88627 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.44■□□□□ 0.22
Slc28a2O88627 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc28a2O88627 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.44■□□□□ 0.22
Slc28a2O88627 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc28a2O88627 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc28a2O88627 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc28a2O88627 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc28a2O88627 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slc28a2O88627 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc28a2O88627 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc28a2O88627 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc28a2O88627 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc28a2O88627 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slc28a2O88627 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.44■□□□□ 0.22
Slc28a2O88627 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slc28a2O88627 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc28a2O88627 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Slc28a2O88627 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc28a2O88627 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slc28a2O88627 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc28a2O88627 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Slc28a2O88627 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.43■□□□□ 0.22
Slc28a2O88627 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Slc28a2O88627 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Slc28a2O88627 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Slc28a2O88627 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc28a2O88627 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc28a2O88627 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slc28a2O88627 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc28a2O88627 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc28a2O88627 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc28a2O88627 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Slc28a2O88627 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc28a2O88627 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc28a2O88627 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Slc28a2O88627 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Slc28a2O88627 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc28a2O88627 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc28a2O88627 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc28a2O88627 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc28a2O88627 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc28a2O88627 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Slc28a2O88627 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc28a2O88627 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc28a2O88627 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc28a2O88627 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.42■□□□□ 0.22
Slc28a2O88627 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc28a2O88627 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Slc28a2O88627 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.42■□□□□ 0.22
Slc28a2O88627 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc28a2O88627 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Slc28a2O88627 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc28a2O88627 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Slc28a2O88627 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Slc28a2O88627 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc28a2O88627 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.41■□□□□ 0.22
Slc28a2O88627 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Slc28a2O88627 Gm27801-201ENSMUST00000184174 223 ntBASIC16.41■□□□□ 0.22
Slc28a2O88627 Gm40848-201ENSMUST00000221998 324 ntBASIC16.41■□□□□ 0.22
Slc28a2O88627 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc28a2O88627 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Slc28a2O88627 BC021767-201ENSMUST00000126387 1716 ntBASIC16.41■□□□□ 0.22
Slc28a2O88627 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc28a2O88627 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc28a2O88627 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc28a2O88627 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.41■□□□□ 0.22
Slc28a2O88627 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Slc28a2O88627 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc28a2O88627 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Slc28a2O88627 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Slc28a2O88627 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Slc28a2O88627 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc28a2O88627 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc28a2O88627 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc28a2O88627 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc28a2O88627 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc28a2O88627 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms