Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn5O54942 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn5O54942 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cldn5O54942 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn5O54942 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn5O54942 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn5O54942 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cldn5O54942 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn5O54942 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn5O54942 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn5O54942 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn5O54942 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn5O54942 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn5O54942 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cldn5O54942 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn5O54942 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Cldn5O54942 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn5O54942 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Cldn5O54942 Gm37856-201ENSMUST00000191634 999 ntBASIC19.27■□□□□ 0.68
Cldn5O54942 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.27■□□□□ 0.68
Cldn5O54942 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.27■□□□□ 0.68
Cldn5O54942 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn5O54942 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn5O54942 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cldn5O54942 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn5O54942 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn5O54942 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn5O54942 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn5O54942 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn5O54942 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn5O54942 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn5O54942 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn5O54942 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn5O54942 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Cldn5O54942 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn5O54942 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Cldn5O54942 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn5O54942 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn5O54942 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.25■□□□□ 0.67
Cldn5O54942 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cldn5O54942 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn5O54942 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn5O54942 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn5O54942 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn5O54942 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn5O54942 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.25■□□□□ 0.67
Cldn5O54942 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn5O54942 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn5O54942 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn5O54942 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn5O54942 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.24■□□□□ 0.67
Cldn5O54942 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn5O54942 Gm12896-201ENSMUST00000118430 226 ntBASIC19.24■□□□□ 0.67
Cldn5O54942 Gm27275-201ENSMUST00000184318 272 ntBASIC19.24■□□□□ 0.67
Cldn5O54942 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn5O54942 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.24■□□□□ 0.67
Cldn5O54942 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn5O54942 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn5O54942 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn5O54942 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn5O54942 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn5O54942 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn5O54942 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn5O54942 Gm44549-201ENSMUST00000208351 577 ntBASIC19.23■□□□□ 0.67
Cldn5O54942 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn5O54942 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn5O54942 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cldn5O54942 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn5O54942 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cldn5O54942 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn5O54942 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn5O54942 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn5O54942 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn5O54942 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn5O54942 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn5O54942 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Cldn5O54942 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn5O54942 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn5O54942 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Cldn5O54942 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.22■□□□□ 0.67
Cldn5O54942 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn5O54942 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn5O54942 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn5O54942 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn5O54942 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Cldn5O54942 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cldn5O54942 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn5O54942 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn5O54942 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn5O54942 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn5O54942 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.21■□□□□ 0.67
Cldn5O54942 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn5O54942 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn5O54942 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn5O54942 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn5O54942 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn5O54942 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Cldn5O54942 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn5O54942 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn5O54942 Gm20760-201ENSMUST00000179197 648 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms