Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Itgb3O54890 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Itgb3O54890 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Itgb3O54890 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Itgb3O54890 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.66■□□□□ 0.74
Itgb3O54890 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Itgb3O54890 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Itgb3O54890 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Itgb3O54890 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb3O54890 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb3O54890 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb3O54890 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb3O54890 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb3O54890 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb3O54890 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.65■□□□□ 0.74
Itgb3O54890 Gm10653-202ENSMUST00000139570 835 ntBASIC19.65■□□□□ 0.74
Itgb3O54890 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb3O54890 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb3O54890 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb3O54890 Gm20049-201ENSMUST00000219950 730 ntBASIC19.65■□□□□ 0.74
Itgb3O54890 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb3O54890 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb3O54890 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.65■□□□□ 0.74
Itgb3O54890 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.65■□□□□ 0.74
Itgb3O54890 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb3O54890 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb3O54890 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb3O54890 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Itgb3O54890 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb3O54890 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb3O54890 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb3O54890 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Itgb3O54890 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Itgb3O54890 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Itgb3O54890 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.64■□□□□ 0.74
Itgb3O54890 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.64■□□□□ 0.73
Itgb3O54890 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Itgb3O54890 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Itgb3O54890 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Itgb3O54890 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.64■□□□□ 0.73
Itgb3O54890 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Itgb3O54890 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Itgb3O54890 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Itgb3O54890 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Itgb3O54890 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.63■□□□□ 0.73
Itgb3O54890 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Itgb3O54890 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.63■□□□□ 0.73
Itgb3O54890 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.63■□□□□ 0.73
Itgb3O54890 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Itgb3O54890 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Itgb3O54890 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Itgb3O54890 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Itgb3O54890 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Itgb3O54890 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Itgb3O54890 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Itgb3O54890 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Itgb3O54890 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Itgb3O54890 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Itgb3O54890 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Itgb3O54890 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Itgb3O54890 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Itgb3O54890 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Itgb3O54890 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Itgb3O54890 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Itgb3O54890 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Itgb3O54890 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Itgb3O54890 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Itgb3O54890 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Itgb3O54890 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Itgb3O54890 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Itgb3O54890 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Itgb3O54890 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Itgb3O54890 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Itgb3O54890 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Itgb3O54890 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.61■□□□□ 0.73
Itgb3O54890 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Itgb3O54890 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Itgb3O54890 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.61■□□□□ 0.73
Itgb3O54890 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Itgb3O54890 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Itgb3O54890 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Itgb3O54890 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Itgb3O54890 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Itgb3O54890 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Itgb3O54890 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.61■□□□□ 0.73
Itgb3O54890 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Itgb3O54890 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Itgb3O54890 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Itgb3O54890 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Itgb3O54890 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Itgb3O54890 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Itgb3O54890 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Itgb3O54890 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.6■□□□□ 0.73
Itgb3O54890 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Itgb3O54890 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Itgb3O54890 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Itgb3O54890 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Itgb3O54890 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Itgb3O54890 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Itgb3O54890 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms