Protein–RNA interactions for Protein: O54786

Dffa, DNA fragmentation factor subunit alpha, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffaO54786 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
DffaO54786 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
DffaO54786 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DffaO54786 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DffaO54786 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DffaO54786 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DffaO54786 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
DffaO54786 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.41■□□□□ 0.7
DffaO54786 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DffaO54786 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
DffaO54786 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DffaO54786 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DffaO54786 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
DffaO54786 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DffaO54786 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DffaO54786 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
DffaO54786 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DffaO54786 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DffaO54786 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DffaO54786 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DffaO54786 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DffaO54786 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
DffaO54786 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.4■□□□□ 0.7
DffaO54786 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DffaO54786 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DffaO54786 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
DffaO54786 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.4■□□□□ 0.7
DffaO54786 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DffaO54786 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DffaO54786 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DffaO54786 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
DffaO54786 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
DffaO54786 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DffaO54786 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DffaO54786 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
DffaO54786 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.39■□□□□ 0.69
DffaO54786 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DffaO54786 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DffaO54786 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
DffaO54786 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DffaO54786 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.39■□□□□ 0.69
DffaO54786 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.39■□□□□ 0.69
DffaO54786 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DffaO54786 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DffaO54786 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
DffaO54786 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DffaO54786 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DffaO54786 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DffaO54786 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.38■□□□□ 0.69
DffaO54786 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DffaO54786 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DffaO54786 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DffaO54786 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DffaO54786 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
DffaO54786 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DffaO54786 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DffaO54786 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
DffaO54786 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.37■□□□□ 0.69
DffaO54786 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DffaO54786 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DffaO54786 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
DffaO54786 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DffaO54786 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
DffaO54786 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
DffaO54786 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DffaO54786 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DffaO54786 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DffaO54786 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.37■□□□□ 0.69
DffaO54786 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DffaO54786 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DffaO54786 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DffaO54786 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DffaO54786 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
DffaO54786 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DffaO54786 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
DffaO54786 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.36■□□□□ 0.69
DffaO54786 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DffaO54786 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.36■□□□□ 0.69
DffaO54786 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
DffaO54786 Gm5874-201ENSMUST00000096101 508 ntBASIC19.36■□□□□ 0.69
DffaO54786 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DffaO54786 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
DffaO54786 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DffaO54786 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DffaO54786 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DffaO54786 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DffaO54786 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DffaO54786 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DffaO54786 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DffaO54786 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DffaO54786 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DffaO54786 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DffaO54786 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DffaO54786 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DffaO54786 Gm13534-201ENSMUST00000121169 513 ntBASIC19.35■□□□□ 0.69
DffaO54786 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.35■□□□□ 0.69
DffaO54786 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
DffaO54786 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DffaO54786 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
DffaO54786 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms