Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sdc4O35988 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sdc4O35988 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sdc4O35988 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sdc4O35988 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.09■□□□□ 0.65
Sdc4O35988 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc4O35988 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc4O35988 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc4O35988 Gm12896-201ENSMUST00000118430 226 ntBASIC19.09■□□□□ 0.65
Sdc4O35988 Gm13168-201ENSMUST00000121771 632 ntBASIC19.09■□□□□ 0.65
Sdc4O35988 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.09■□□□□ 0.65
Sdc4O35988 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.09■□□□□ 0.65
Sdc4O35988 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.09■□□□□ 0.65
Sdc4O35988 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc4O35988 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc4O35988 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc4O35988 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc4O35988 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc4O35988 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sdc4O35988 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Sdc4O35988 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sdc4O35988 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sdc4O35988 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sdc4O35988 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
Sdc4O35988 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sdc4O35988 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sdc4O35988 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sdc4O35988 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sdc4O35988 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Sdc4O35988 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sdc4O35988 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sdc4O35988 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sdc4O35988 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Sdc4O35988 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.07■□□□□ 0.64
Sdc4O35988 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sdc4O35988 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.07■□□□□ 0.64
Sdc4O35988 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sdc4O35988 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sdc4O35988 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sdc4O35988 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sdc4O35988 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sdc4O35988 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sdc4O35988 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sdc4O35988 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sdc4O35988 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sdc4O35988 Iqck-206ENSMUST00000208658 2891 ntBASIC19.06■□□□□ 0.64
Sdc4O35988 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sdc4O35988 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sdc4O35988 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
Sdc4O35988 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sdc4O35988 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sdc4O35988 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sdc4O35988 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sdc4O35988 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sdc4O35988 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sdc4O35988 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sdc4O35988 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sdc4O35988 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sdc4O35988 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sdc4O35988 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Sdc4O35988 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Sdc4O35988 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sdc4O35988 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.04■□□□□ 0.64
Sdc4O35988 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sdc4O35988 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sdc4O35988 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.04■□□□□ 0.64
Sdc4O35988 Gm27275-201ENSMUST00000184318 272 ntBASIC19.04■□□□□ 0.64
Sdc4O35988 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sdc4O35988 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sdc4O35988 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sdc4O35988 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sdc4O35988 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Sdc4O35988 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sdc4O35988 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.03■□□□□ 0.64
Sdc4O35988 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sdc4O35988 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.03■□□□□ 0.64
Sdc4O35988 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sdc4O35988 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sdc4O35988 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sdc4O35988 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sdc4O35988 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sdc4O35988 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.02■□□□□ 0.64
Sdc4O35988 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sdc4O35988 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.02■□□□□ 0.63
Sdc4O35988 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sdc4O35988 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc4O35988 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Sdc4O35988 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc4O35988 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc4O35988 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc4O35988 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.01■□□□□ 0.63
Sdc4O35988 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.01■□□□□ 0.63
Sdc4O35988 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc4O35988 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc4O35988 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Sdc4O35988 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.01■□□□□ 0.63
Sdc4O35988 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc4O35988 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Sdc4O35988 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19■□□□□ 0.63
Sdc4O35988 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms