Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pkd1O08852 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pkd1O08852 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pkd1O08852 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pkd1O08852 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pkd1O08852 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pkd1O08852 Gm45560-201ENSMUST00000211492 1472 ntBASIC11.89□□□□□ -0.51
Pkd1O08852 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pkd1O08852 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC11.89□□□□□ -0.51
Pkd1O08852 Gm10138-203ENSMUST00000206952 366 ntBASIC11.89□□□□□ -0.51
Pkd1O08852 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pkd1O08852 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pkd1O08852 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pkd1O08852 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pkd1O08852 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pkd1O08852 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pkd1O08852 Gm5867-201ENSMUST00000063197 592 ntBASIC11.88□□□□□ -0.51
Pkd1O08852 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pkd1O08852 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pkd1O08852 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pkd1O08852 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pkd1O08852 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pkd1O08852 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pkd1O08852 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC11.88□□□□□ -0.51
Pkd1O08852 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pkd1O08852 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pkd1O08852 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pkd1O08852 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC11.88□□□□□ -0.51
Pkd1O08852 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pkd1O08852 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC11.87□□□□□ -0.51
Pkd1O08852 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pkd1O08852 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pkd1O08852 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC11.87□□□□□ -0.51
Pkd1O08852 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pkd1O08852 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Pkd1O08852 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC11.87□□□□□ -0.51
Pkd1O08852 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.87□□□□□ -0.51
Pkd1O08852 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pkd1O08852 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Pkd1O08852 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pkd1O08852 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC11.87□□□□□ -0.51
Pkd1O08852 Gm10654-201ENSMUST00000098653 1633 ntBASIC11.87□□□□□ -0.51
Pkd1O08852 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pkd1O08852 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pkd1O08852 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pkd1O08852 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.86□□□□□ -0.51
Pkd1O08852 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pkd1O08852 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pkd1O08852 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pkd1O08852 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC11.86□□□□□ -0.51
Pkd1O08852 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pkd1O08852 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pkd1O08852 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pkd1O08852 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pkd1O08852 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Pkd1O08852 Zfp783-201ENSMUST00000095946 670 ntBASIC11.86□□□□□ -0.51
Pkd1O08852 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pkd1O08852 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pkd1O08852 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pkd1O08852 Gm7284-201ENSMUST00000131667 944 ntBASIC11.86□□□□□ -0.51
Pkd1O08852 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pkd1O08852 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pkd1O08852 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Pkd1O08852 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pkd1O08852 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pkd1O08852 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pkd1O08852 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pkd1O08852 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Pkd1O08852 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Pkd1O08852 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pkd1O08852 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pkd1O08852 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pkd1O08852 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pkd1O08852 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Pkd1O08852 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pkd1O08852 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC11.84□□□□□ -0.51
Pkd1O08852 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Pkd1O08852 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pkd1O08852 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pkd1O08852 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pkd1O08852 Mir6349-201ENSMUST00000184059 97 ntBASIC11.84□□□□□ -0.51
Pkd1O08852 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC11.84□□□□□ -0.51
Pkd1O08852 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Pkd1O08852 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pkd1O08852 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pkd1O08852 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pkd1O08852 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pkd1O08852 Gm28033-201ENSMUST00000184224 96 ntBASIC11.84□□□□□ -0.51
Pkd1O08852 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pkd1O08852 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pkd1O08852 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC11.83□□□□□ -0.51
Pkd1O08852 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Pkd1O08852 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Pkd1O08852 Gm12382-201ENSMUST00000122005 922 ntBASIC11.83□□□□□ -0.51
Pkd1O08852 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC11.83□□□□□ -0.51
Pkd1O08852 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.51
Pkd1O08852 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pkd1O08852 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pkd1O08852 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pkd1O08852 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms