Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Raet1aO08602 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Raet1aO08602 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Raet1aO08602 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Raet1aO08602 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Raet1aO08602 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Raet1aO08602 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Raet1aO08602 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Raet1aO08602 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.43■□□□□ 0.22
Raet1aO08602 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.43■□□□□ 0.22
Raet1aO08602 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Raet1aO08602 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Raet1aO08602 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.43■□□□□ 0.22
Raet1aO08602 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Raet1aO08602 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Raet1aO08602 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
Raet1aO08602 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Raet1aO08602 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.42■□□□□ 0.22
Raet1aO08602 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Raet1aO08602 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.42■□□□□ 0.22
Raet1aO08602 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Raet1aO08602 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Raet1aO08602 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Raet1aO08602 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.42■□□□□ 0.22
Raet1aO08602 Gm10033-202ENSMUST00000211874 928 ntBASIC16.42■□□□□ 0.22
Raet1aO08602 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Raet1aO08602 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Raet1aO08602 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Raet1aO08602 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Raet1aO08602 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Raet1aO08602 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Raet1aO08602 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Raet1aO08602 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Raet1aO08602 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.41■□□□□ 0.22
Raet1aO08602 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Raet1aO08602 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.41■□□□□ 0.22
Raet1aO08602 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Raet1aO08602 Gm42642-201ENSMUST00000200683 355 ntBASIC16.41■□□□□ 0.22
Raet1aO08602 Gm18671-201ENSMUST00000214826 683 ntBASIC16.41■□□□□ 0.22
Raet1aO08602 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Raet1aO08602 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Raet1aO08602 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Raet1aO08602 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Raet1aO08602 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Raet1aO08602 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Raet1aO08602 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Raet1aO08602 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Raet1aO08602 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Raet1aO08602 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Raet1aO08602 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Raet1aO08602 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
Raet1aO08602 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.4■□□□□ 0.22
Raet1aO08602 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Raet1aO08602 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Raet1aO08602 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Raet1aO08602 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Raet1aO08602 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Raet1aO08602 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Raet1aO08602 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Raet1aO08602 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Raet1aO08602 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Raet1aO08602 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Raet1aO08602 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Raet1aO08602 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Raet1aO08602 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Raet1aO08602 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Raet1aO08602 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Raet1aO08602 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Raet1aO08602 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Raet1aO08602 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Raet1aO08602 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Raet1aO08602 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.38■□□□□ 0.21
Raet1aO08602 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Raet1aO08602 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Raet1aO08602 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Raet1aO08602 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Raet1aO08602 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Raet1aO08602 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Raet1aO08602 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Raet1aO08602 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Raet1aO08602 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Raet1aO08602 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Raet1aO08602 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.38■□□□□ 0.21
Raet1aO08602 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Raet1aO08602 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Raet1aO08602 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Raet1aO08602 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Raet1aO08602 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Raet1aO08602 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Raet1aO08602 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.38■□□□□ 0.21
Raet1aO08602 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Raet1aO08602 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Raet1aO08602 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Raet1aO08602 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.38■□□□□ 0.21
Raet1aO08602 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Raet1aO08602 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Raet1aO08602 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Raet1aO08602 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Raet1aO08602 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Raet1aO08602 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms