Protein–RNA interactions for Protein: H3BJZ2

Cdhr4, Cadherin-related family member 4, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr4H3BJZ2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr4H3BJZ2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr4H3BJZ2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Cdhr4H3BJZ2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr4H3BJZ2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdhr4H3BJZ2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdhr4H3BJZ2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdhr4H3BJZ2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cdhr4H3BJZ2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdhr4H3BJZ2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdhr4H3BJZ2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdhr4H3BJZ2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cdhr4H3BJZ2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdhr4H3BJZ2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdhr4H3BJZ2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdhr4H3BJZ2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cdhr4H3BJZ2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdhr4H3BJZ2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.39■□□□□ 0.21
Cdhr4H3BJZ2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr4H3BJZ2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr4H3BJZ2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr4H3BJZ2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr4H3BJZ2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr4H3BJZ2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr4H3BJZ2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Cdhr4H3BJZ2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.38■□□□□ 0.21
Cdhr4H3BJZ2 Gm12527-201ENSMUST00000117967 564 ntBASIC16.38■□□□□ 0.21
Cdhr4H3BJZ2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.38■□□□□ 0.21
Cdhr4H3BJZ2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.38■□□□□ 0.21
Cdhr4H3BJZ2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Cdhr4H3BJZ2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Cdhr4H3BJZ2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr4H3BJZ2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr4H3BJZ2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr4H3BJZ2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr4H3BJZ2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr4H3BJZ2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr4H3BJZ2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr4H3BJZ2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdhr4H3BJZ2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdhr4H3BJZ2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdhr4H3BJZ2 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.37■□□□□ 0.21
Cdhr4H3BJZ2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdhr4H3BJZ2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdhr4H3BJZ2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Cdhr4H3BJZ2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdhr4H3BJZ2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdhr4H3BJZ2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdhr4H3BJZ2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.37■□□□□ 0.21
Cdhr4H3BJZ2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.37■□□□□ 0.21
Cdhr4H3BJZ2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdhr4H3BJZ2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Cdhr4H3BJZ2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdhr4H3BJZ2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.36■□□□□ 0.21
Cdhr4H3BJZ2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdhr4H3BJZ2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdhr4H3BJZ2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdhr4H3BJZ2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdhr4H3BJZ2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdhr4H3BJZ2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Cdhr4H3BJZ2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.36■□□□□ 0.21
Cdhr4H3BJZ2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdhr4H3BJZ2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdhr4H3BJZ2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Cdhr4H3BJZ2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdhr4H3BJZ2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdhr4H3BJZ2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdhr4H3BJZ2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr4H3BJZ2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr4H3BJZ2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr4H3BJZ2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr4H3BJZ2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr4H3BJZ2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr4H3BJZ2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr4H3BJZ2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr4H3BJZ2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr4H3BJZ2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr4H3BJZ2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
Cdhr4H3BJZ2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr4H3BJZ2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Cdhr4H3BJZ2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Cdhr4H3BJZ2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr4H3BJZ2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr4H3BJZ2 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.35■□□□□ 0.21
Cdhr4H3BJZ2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr4H3BJZ2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr4H3BJZ2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cdhr4H3BJZ2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr4H3BJZ2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdhr4H3BJZ2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cdhr4H3BJZ2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdhr4H3BJZ2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdhr4H3BJZ2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cdhr4H3BJZ2 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.34■□□□□ 0.21
Cdhr4H3BJZ2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdhr4H3BJZ2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdhr4H3BJZ2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdhr4H3BJZ2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdhr4H3BJZ2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.34■□□□□ 0.21
Cdhr4H3BJZ2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms