Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc188F6WEU2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ccdc188F6WEU2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc188F6WEU2 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.88■□□□□ 0.61
Ccdc188F6WEU2 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc188F6WEU2 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.88■□□□□ 0.61
Ccdc188F6WEU2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc188F6WEU2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc188F6WEU2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc188F6WEU2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ccdc188F6WEU2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc188F6WEU2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc188F6WEU2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc188F6WEU2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc188F6WEU2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc188F6WEU2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc188F6WEU2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc188F6WEU2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Ccdc188F6WEU2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.87■□□□□ 0.61
Ccdc188F6WEU2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc188F6WEU2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.87■□□□□ 0.61
Ccdc188F6WEU2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc188F6WEU2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc188F6WEU2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc188F6WEU2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc188F6WEU2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc188F6WEU2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc188F6WEU2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Ccdc188F6WEU2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.86■□□□□ 0.61
Ccdc188F6WEU2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc188F6WEU2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc188F6WEU2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc188F6WEU2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc188F6WEU2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ccdc188F6WEU2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.86■□□□□ 0.61
Ccdc188F6WEU2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc188F6WEU2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc188F6WEU2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc188F6WEU2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc188F6WEU2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.86■□□□□ 0.61
Ccdc188F6WEU2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc188F6WEU2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.85■□□□□ 0.61
Ccdc188F6WEU2 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.85■□□□□ 0.61
Ccdc188F6WEU2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc188F6WEU2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc188F6WEU2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc188F6WEU2 Gm18115-201ENSMUST00000221209 621 ntBASIC18.85■□□□□ 0.61
Ccdc188F6WEU2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc188F6WEU2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc188F6WEU2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc188F6WEU2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc188F6WEU2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Ccdc188F6WEU2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc188F6WEU2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc188F6WEU2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc188F6WEU2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc188F6WEU2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc188F6WEU2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc188F6WEU2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc188F6WEU2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.84■□□□□ 0.61
Ccdc188F6WEU2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc188F6WEU2 Gm5587-201ENSMUST00000206270 674 ntBASIC18.84■□□□□ 0.61
Ccdc188F6WEU2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ccdc188F6WEU2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc188F6WEU2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.84■□□□□ 0.61
Ccdc188F6WEU2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc188F6WEU2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc188F6WEU2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc188F6WEU2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc188F6WEU2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc188F6WEU2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc188F6WEU2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc188F6WEU2 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.83■□□□□ 0.61
Ccdc188F6WEU2 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc188F6WEU2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc188F6WEU2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.83■□□□□ 0.6
Ccdc188F6WEU2 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.83■□□□□ 0.6
Ccdc188F6WEU2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.83■□□□□ 0.6
Ccdc188F6WEU2 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.83■□□□□ 0.6
Ccdc188F6WEU2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc188F6WEU2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc188F6WEU2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.83■□□□□ 0.6
Ccdc188F6WEU2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Ccdc188F6WEU2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Ccdc188F6WEU2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc188F6WEU2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.82■□□□□ 0.6
Ccdc188F6WEU2 Gm17808-201ENSMUST00000200859 894 ntBASIC18.82■□□□□ 0.6
Ccdc188F6WEU2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.82■□□□□ 0.6
Ccdc188F6WEU2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc188F6WEU2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc188F6WEU2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc188F6WEU2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc188F6WEU2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc188F6WEU2 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.81■□□□□ 0.6
Ccdc188F6WEU2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.81■□□□□ 0.6
Ccdc188F6WEU2 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.81■□□□□ 0.6
Ccdc188F6WEU2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ccdc188F6WEU2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc188F6WEU2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc188F6WEU2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms