Protein–RNA interactions for Protein: B4XVP9

Phf11c, PHD finger protein 11C, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf11cB4XVP9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Phf11cB4XVP9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Phf11cB4XVP9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.56■□□□□ 0.4
Phf11cB4XVP9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Phf11cB4XVP9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Phf11cB4XVP9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Phf11cB4XVP9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Phf11cB4XVP9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Phf11cB4XVP9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.55■□□□□ 0.4
Phf11cB4XVP9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Phf11cB4XVP9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Phf11cB4XVP9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Phf11cB4XVP9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Phf11cB4XVP9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Phf11cB4XVP9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Phf11cB4XVP9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Phf11cB4XVP9 Gm13241-201ENSMUST00000094493 780 ntBASIC17.55■□□□□ 0.4
Phf11cB4XVP9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Phf11cB4XVP9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Phf11cB4XVP9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Phf11cB4XVP9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Phf11cB4XVP9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Phf11cB4XVP9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Phf11cB4XVP9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Phf11cB4XVP9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Phf11cB4XVP9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Phf11cB4XVP9 Gm43173-201ENSMUST00000202246 593 ntBASIC17.54■□□□□ 0.4
Phf11cB4XVP9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Phf11cB4XVP9 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.54■□□□□ 0.4
Phf11cB4XVP9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Phf11cB4XVP9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Phf11cB4XVP9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.53■□□□□ 0.4
Phf11cB4XVP9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Phf11cB4XVP9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Phf11cB4XVP9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Phf11cB4XVP9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Phf11cB4XVP9 Gm8493-201ENSMUST00000196881 489 ntBASIC17.53■□□□□ 0.4
Phf11cB4XVP9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.53■□□□□ 0.4
Phf11cB4XVP9 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.53■□□□□ 0.4
Phf11cB4XVP9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Phf11cB4XVP9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Phf11cB4XVP9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Phf11cB4XVP9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Phf11cB4XVP9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Phf11cB4XVP9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.53■□□□□ 0.4
Phf11cB4XVP9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.53■□□□□ 0.4
Phf11cB4XVP9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Phf11cB4XVP9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Phf11cB4XVP9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Phf11cB4XVP9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Phf11cB4XVP9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Phf11cB4XVP9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Phf11cB4XVP9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Phf11cB4XVP9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Phf11cB4XVP9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Phf11cB4XVP9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Phf11cB4XVP9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Phf11cB4XVP9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Phf11cB4XVP9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
Phf11cB4XVP9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Phf11cB4XVP9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Phf11cB4XVP9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Phf11cB4XVP9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Phf11cB4XVP9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Phf11cB4XVP9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Phf11cB4XVP9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Phf11cB4XVP9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Phf11cB4XVP9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Phf11cB4XVP9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Phf11cB4XVP9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Phf11cB4XVP9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Phf11cB4XVP9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Phf11cB4XVP9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Phf11cB4XVP9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Phf11cB4XVP9 Gm27801-201ENSMUST00000184174 223 ntBASIC17.5■□□□□ 0.39
Phf11cB4XVP9 Gm40848-201ENSMUST00000221998 324 ntBASIC17.5■□□□□ 0.39
Phf11cB4XVP9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Phf11cB4XVP9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Phf11cB4XVP9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Phf11cB4XVP9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.5■□□□□ 0.39
Phf11cB4XVP9 Fst-202ENSMUST00000223640 2612 ntBASIC17.5■□□□□ 0.39
Phf11cB4XVP9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Phf11cB4XVP9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Phf11cB4XVP9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.49■□□□□ 0.39
Phf11cB4XVP9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Phf11cB4XVP9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Phf11cB4XVP9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Phf11cB4XVP9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Phf11cB4XVP9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Phf11cB4XVP9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Phf11cB4XVP9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Phf11cB4XVP9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Phf11cB4XVP9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.49■□□□□ 0.39
Phf11cB4XVP9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.49■□□□□ 0.39
Phf11cB4XVP9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Phf11cB4XVP9 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.49■□□□□ 0.39
Phf11cB4XVP9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.49■□□□□ 0.39
Phf11cB4XVP9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Phf11cB4XVP9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.49■□□□□ 0.39
Phf11cB4XVP9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms