Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm12887B1AVM1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm12887B1AVM1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm12887B1AVM1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Gm12887B1AVM1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Gm12887B1AVM1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.02■□□□□ -0
Gm12887B1AVM1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.02■□□□□ -0
Gm12887B1AVM1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm12887B1AVM1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC15.02■□□□□ -0
Gm12887B1AVM1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Gm12887B1AVM1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gm12887B1AVM1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gm12887B1AVM1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gm12887B1AVM1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gm12887B1AVM1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gm12887B1AVM1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm12887B1AVM1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gm12887B1AVM1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gm12887B1AVM1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm12887B1AVM1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm12887B1AVM1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Gm12887B1AVM1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm12887B1AVM1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm12887B1AVM1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gm12887B1AVM1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm12887B1AVM1 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.01□□□□□ -0.01
Gm12887B1AVM1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.01□□□□□ -0.01
Gm12887B1AVM1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm12887B1AVM1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
Gm12887B1AVM1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm12887B1AVM1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm12887B1AVM1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gm12887B1AVM1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.01□□□□□ -0.01
Gm12887B1AVM1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gm12887B1AVM1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Gm12887B1AVM1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm12887B1AVM1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm12887B1AVM1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm12887B1AVM1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Gm12887B1AVM1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm12887B1AVM1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm12887B1AVM1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm12887B1AVM1 Gm5828-201ENSMUST00000071842 1860 ntBASIC15□□□□□ -0.01
Gm12887B1AVM1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15□□□□□ -0.01
Gm12887B1AVM1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm12887B1AVM1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Gm12887B1AVM1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Gm12887B1AVM1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm12887B1AVM1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Gm12887B1AVM1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm12887B1AVM1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm12887B1AVM1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Gm12887B1AVM1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm12887B1AVM1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm12887B1AVM1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15□□□□□ -0.01
Gm12887B1AVM1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm12887B1AVM1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm12887B1AVM1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Gm12887B1AVM1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Gm12887B1AVM1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.99□□□□□ -0.01
Gm12887B1AVM1 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.99□□□□□ -0.01
Gm12887B1AVM1 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.99□□□□□ -0.01
Gm12887B1AVM1 Gm18755-201ENSMUST00000218030 1099 ntBASIC14.99□□□□□ -0.01
Gm12887B1AVM1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm12887B1AVM1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm12887B1AVM1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm12887B1AVM1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm12887B1AVM1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm12887B1AVM1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm12887B1AVM1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm12887B1AVM1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm12887B1AVM1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Gm12887B1AVM1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm12887B1AVM1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Gm12887B1AVM1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm12887B1AVM1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm12887B1AVM1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm12887B1AVM1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm12887B1AVM1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm12887B1AVM1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm12887B1AVM1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Gm12887B1AVM1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm12887B1AVM1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm12887B1AVM1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Gm12887B1AVM1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm12887B1AVM1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Gm12887B1AVM1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Gm12887B1AVM1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm12887B1AVM1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm12887B1AVM1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm12887B1AVM1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm12887B1AVM1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm12887B1AVM1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Gm12887B1AVM1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Gm12887B1AVM1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Gm12887B1AVM1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Gm12887B1AVM1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm12887B1AVM1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm12887B1AVM1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm12887B1AVM1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms