Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Col6a5A6H584 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a5A6H584 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a5A6H584 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a5A6H584 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a5A6H584 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a5A6H584 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a5A6H584 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a5A6H584 Gm18958-201ENSMUST00000174258 762 ntBASIC14.08□□□□□ -0.16
Col6a5A6H584 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.08□□□□□ -0.16
Col6a5A6H584 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a5A6H584 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Col6a5A6H584 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.08□□□□□ -0.16
Col6a5A6H584 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a5A6H584 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a5A6H584 Gm9013-201ENSMUST00000132939 882 ntBASIC14.08□□□□□ -0.16
Col6a5A6H584 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.08□□□□□ -0.16
Col6a5A6H584 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.08□□□□□ -0.16
Col6a5A6H584 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a5A6H584 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.08□□□□□ -0.16
Col6a5A6H584 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a5A6H584 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a5A6H584 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a5A6H584 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a5A6H584 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a5A6H584 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.07□□□□□ -0.16
Col6a5A6H584 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a5A6H584 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Col6a5A6H584 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Col6a5A6H584 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Col6a5A6H584 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Col6a5A6H584 Gm27525-201ENSMUST00000184465 107 ntBASIC14.07□□□□□ -0.16
Col6a5A6H584 Gm27459-201ENSMUST00000184860 107 ntBASIC14.07□□□□□ -0.16
Col6a5A6H584 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a5A6H584 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.07□□□□□ -0.16
Col6a5A6H584 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a5A6H584 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a5A6H584 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a5A6H584 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Col6a5A6H584 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a5A6H584 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.07□□□□□ -0.16
Col6a5A6H584 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Col6a5A6H584 Gm27463-201ENSMUST00000183569 57 ntBASIC14.07□□□□□ -0.16
Col6a5A6H584 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.07□□□□□ -0.16
Col6a5A6H584 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Col6a5A6H584 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Col6a5A6H584 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.06□□□□□ -0.16
Col6a5A6H584 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.06□□□□□ -0.16
Col6a5A6H584 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a5A6H584 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a5A6H584 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a5A6H584 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a5A6H584 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a5A6H584 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.06□□□□□ -0.16
Col6a5A6H584 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a5A6H584 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.06□□□□□ -0.16
Col6a5A6H584 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a5A6H584 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Col6a5A6H584 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Col6a5A6H584 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a5A6H584 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a5A6H584 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a5A6H584 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a5A6H584 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a5A6H584 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a5A6H584 Gm2274-201ENSMUST00000184539 609 ntBASIC14.05□□□□□ -0.16
Col6a5A6H584 Gm10138-203ENSMUST00000206952 366 ntBASIC14.05□□□□□ -0.16
Col6a5A6H584 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a5A6H584 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a5A6H584 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a5A6H584 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a5A6H584 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a5A6H584 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a5A6H584 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Col6a5A6H584 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Col6a5A6H584 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a5A6H584 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a5A6H584 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.05□□□□□ -0.16
Col6a5A6H584 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.05□□□□□ -0.16
Col6a5A6H584 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a5A6H584 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Col6a5A6H584 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.04□□□□□ -0.16
Col6a5A6H584 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.04□□□□□ -0.16
Col6a5A6H584 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a5A6H584 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a5A6H584 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a5A6H584 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a5A6H584 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a5A6H584 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a5A6H584 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a5A6H584 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.04□□□□□ -0.16
Col6a5A6H584 Gm7063-201ENSMUST00000186840 981 ntBASIC14.04□□□□□ -0.16
Col6a5A6H584 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a5A6H584 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a5A6H584 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Col6a5A6H584 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a5A6H584 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a5A6H584 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a5A6H584 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a5A6H584 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms