Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Golph3-205ENSMUST00000228671 2842 ntBASIC19.54■□□□□ 0.72
Scn1aA2APX8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn1aA2APX8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn1aA2APX8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn1aA2APX8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn1aA2APX8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scn1aA2APX8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Scn1aA2APX8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Scn1aA2APX8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn1aA2APX8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Scn1aA2APX8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.53■□□□□ 0.72
Scn1aA2APX8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scn1aA2APX8 Gm2559-201ENSMUST00000201323 363 ntBASIC19.53■□□□□ 0.72
Scn1aA2APX8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn1aA2APX8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scn1aA2APX8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scn1aA2APX8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn1aA2APX8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Scn1aA2APX8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn1aA2APX8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.53■□□□□ 0.72
Scn1aA2APX8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn1aA2APX8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn1aA2APX8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Scn1aA2APX8 Gm20760-201ENSMUST00000179197 648 ntBASIC19.52■□□□□ 0.72
Scn1aA2APX8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.52■□□□□ 0.72
Scn1aA2APX8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Scn1aA2APX8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn1aA2APX8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn1aA2APX8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn1aA2APX8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn1aA2APX8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.52■□□□□ 0.72
Scn1aA2APX8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Scn1aA2APX8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.52■□□□□ 0.72
Scn1aA2APX8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn1aA2APX8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scn1aA2APX8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scn1aA2APX8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scn1aA2APX8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scn1aA2APX8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scn1aA2APX8 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.51■□□□□ 0.71
Scn1aA2APX8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Scn1aA2APX8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn1aA2APX8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn1aA2APX8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scn1aA2APX8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn1aA2APX8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn1aA2APX8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn1aA2APX8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scn1aA2APX8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn1aA2APX8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.51■□□□□ 0.71
Scn1aA2APX8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Scn1aA2APX8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn1aA2APX8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Scn1aA2APX8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn1aA2APX8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn1aA2APX8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.5■□□□□ 0.71
Scn1aA2APX8 Gm12896-201ENSMUST00000118430 226 ntBASIC19.5■□□□□ 0.71
Scn1aA2APX8 Gm13168-201ENSMUST00000121771 632 ntBASIC19.5■□□□□ 0.71
Scn1aA2APX8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Scn1aA2APX8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn1aA2APX8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn1aA2APX8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn1aA2APX8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn1aA2APX8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn1aA2APX8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn1aA2APX8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scn1aA2APX8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scn1aA2APX8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scn1aA2APX8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn1aA2APX8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn1aA2APX8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn1aA2APX8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn1aA2APX8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.48■□□□□ 0.71
Scn1aA2APX8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scn1aA2APX8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn1aA2APX8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn1aA2APX8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn1aA2APX8 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.48■□□□□ 0.71
Scn1aA2APX8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn1aA2APX8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.48■□□□□ 0.71
Scn1aA2APX8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn1aA2APX8 Gm5643-201ENSMUST00000117081 966 ntBASIC19.47■□□□□ 0.71
Scn1aA2APX8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Scn1aA2APX8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scn1aA2APX8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.47■□□□□ 0.71
Scn1aA2APX8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.47■□□□□ 0.71
Scn1aA2APX8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn1aA2APX8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Scn1aA2APX8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.47■□□□□ 0.71
Scn1aA2APX8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.47■□□□□ 0.71
Scn1aA2APX8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.47■□□□□ 0.71
Scn1aA2APX8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn1aA2APX8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.47■□□□□ 0.71
Scn1aA2APX8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn1aA2APX8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn1aA2APX8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn1aA2APX8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn1aA2APX8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Scn1aA2APX8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn1aA2APX8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms