Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC9.9□□□□□ -0.83
Ubr4A2AN08 Gm2213-201ENSMUST00000197485 688 ntBASIC9.9□□□□□ -0.83
Ubr4A2AN08 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Ubr4A2AN08 Gm2274-201ENSMUST00000184539 609 ntBASIC9.89□□□□□ -0.83
Ubr4A2AN08 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC9.89□□□□□ -0.83
Ubr4A2AN08 Hist1h2al-201ENSMUST00000091708 339 ntBASIC9.89□□□□□ -0.83
Ubr4A2AN08 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC9.89□□□□□ -0.83
Ubr4A2AN08 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ubr4A2AN08 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Ubr4A2AN08 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ubr4A2AN08 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Ubr4A2AN08 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Ubr4A2AN08 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ubr4A2AN08 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC9.89□□□□□ -0.83
Ubr4A2AN08 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ubr4A2AN08 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC9.89□□□□□ -0.83
Ubr4A2AN08 Flg-201ENSMUST00000050758 1488 ntBASIC9.89□□□□□ -0.83
Ubr4A2AN08 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ubr4A2AN08 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ubr4A2AN08 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ubr4A2AN08 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ubr4A2AN08 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ubr4A2AN08 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ubr4A2AN08 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ubr4A2AN08 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC9.88□□□□□ -0.83
Ubr4A2AN08 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ubr4A2AN08 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ubr4A2AN08 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ubr4A2AN08 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ubr4A2AN08 Mtag2-201ENSMUST00000058665 714 ntBASIC9.88□□□□□ -0.83
Ubr4A2AN08 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ubr4A2AN08 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ubr4A2AN08 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC9.88□□□□□ -0.83
Ubr4A2AN08 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ubr4A2AN08 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC9.88□□□□□ -0.83
Ubr4A2AN08 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Ubr4A2AN08 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC9.88□□□□□ -0.83
Ubr4A2AN08 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ubr4A2AN08 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ubr4A2AN08 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ubr4A2AN08 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ubr4A2AN08 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ubr4A2AN08 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ubr4A2AN08 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC9.87□□□□□ -0.83
Ubr4A2AN08 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ubr4A2AN08 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ubr4A2AN08 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Ubr4A2AN08 AC164883.3-201ENSMUST00000227396 1774 ntBASIC9.87□□□□□ -0.83
Ubr4A2AN08 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ubr4A2AN08 Gm43909-201ENSMUST00000203443 1876 ntBASIC9.87□□□□□ -0.83
Ubr4A2AN08 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ubr4A2AN08 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC9.87□□□□□ -0.83
Ubr4A2AN08 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ubr4A2AN08 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ubr4A2AN08 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC9.87□□□□□ -0.83
Ubr4A2AN08 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC9.87□□□□□ -0.83
Ubr4A2AN08 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ubr4A2AN08 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ubr4A2AN08 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ubr4A2AN08 Gm10418-201ENSMUST00000100943 576 ntBASIC9.86□□□□□ -0.83
Ubr4A2AN08 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Ubr4A2AN08 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC9.86□□□□□ -0.83
Ubr4A2AN08 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ubr4A2AN08 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ubr4A2AN08 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ubr4A2AN08 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ubr4A2AN08 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ubr4A2AN08 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ubr4A2AN08 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Ubr4A2AN08 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ubr4A2AN08 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ubr4A2AN08 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Ubr4A2AN08 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ubr4A2AN08 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ubr4A2AN08 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ubr4A2AN08 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC9.86□□□□□ -0.83
Ubr4A2AN08 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ubr4A2AN08 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Ubr4A2AN08 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ubr4A2AN08 Gm11950-201ENSMUST00000121615 838 ntBASIC9.86□□□□□ -0.83
Ubr4A2AN08 Gm6736-201ENSMUST00000166583 948 ntBASIC9.86□□□□□ -0.83
Ubr4A2AN08 Mir3547-201ENSMUST00000175461 88 ntBASIC9.86□□□□□ -0.83
Ubr4A2AN08 CT943659.1-201ENSMUST00000215459 326 ntBASIC9.86□□□□□ -0.83
Ubr4A2AN08 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ubr4A2AN08 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Ubr4A2AN08 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Ubr4A2AN08 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ubr4A2AN08 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ubr4A2AN08 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ubr4A2AN08 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC9.85□□□□□ -0.83
Ubr4A2AN08 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC9.85□□□□□ -0.83
Ubr4A2AN08 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Ubr4A2AN08 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Ubr4A2AN08 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Ubr4A2AN08 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Ubr4A2AN08 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC9.85□□□□□ -0.83
Ubr4A2AN08 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ubr4A2AN08 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Ubr4A2AN08 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ubr4A2AN08 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms