Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc112A0AUP1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Ccdc112A0AUP1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc112A0AUP1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc112A0AUP1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc112A0AUP1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.17■□□□□ 0.98
Ccdc112A0AUP1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Ccdc112A0AUP1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc112A0AUP1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc112A0AUP1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc112A0AUP1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc112A0AUP1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc112A0AUP1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc112A0AUP1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc112A0AUP1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc112A0AUP1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Ccdc112A0AUP1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.16■□□□□ 0.98
Ccdc112A0AUP1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc112A0AUP1 Gm43017-201ENSMUST00000198296 752 ntBASIC21.16■□□□□ 0.98
Ccdc112A0AUP1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Ccdc112A0AUP1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc112A0AUP1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc112A0AUP1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc112A0AUP1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc112A0AUP1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc112A0AUP1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Ccdc112A0AUP1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc112A0AUP1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc112A0AUP1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Ccdc112A0AUP1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc112A0AUP1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc112A0AUP1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc112A0AUP1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc112A0AUP1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc112A0AUP1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc112A0AUP1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc112A0AUP1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Ccdc112A0AUP1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc112A0AUP1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc112A0AUP1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc112A0AUP1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc112A0AUP1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.14■□□□□ 0.97
Ccdc112A0AUP1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc112A0AUP1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Ccdc112A0AUP1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc112A0AUP1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc112A0AUP1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Ccdc112A0AUP1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc112A0AUP1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Ccdc112A0AUP1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc112A0AUP1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc112A0AUP1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.13■□□□□ 0.97
Ccdc112A0AUP1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc112A0AUP1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc112A0AUP1 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.13■□□□□ 0.97
Ccdc112A0AUP1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc112A0AUP1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc112A0AUP1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc112A0AUP1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc112A0AUP1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc112A0AUP1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc112A0AUP1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc112A0AUP1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.12■□□□□ 0.97
Ccdc112A0AUP1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc112A0AUP1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc112A0AUP1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc112A0AUP1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc112A0AUP1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc112A0AUP1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc112A0AUP1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.12■□□□□ 0.97
Ccdc112A0AUP1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc112A0AUP1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc112A0AUP1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc112A0AUP1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc112A0AUP1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc112A0AUP1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ccdc112A0AUP1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc112A0AUP1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc112A0AUP1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc112A0AUP1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc112A0AUP1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc112A0AUP1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc112A0AUP1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.11■□□□□ 0.97
Ccdc112A0AUP1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc112A0AUP1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.11■□□□□ 0.97
Ccdc112A0AUP1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc112A0AUP1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc112A0AUP1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.11■□□□□ 0.97
Ccdc112A0AUP1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc112A0AUP1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc112A0AUP1 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.11■□□□□ 0.97
Ccdc112A0AUP1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc112A0AUP1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc112A0AUP1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc112A0AUP1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc112A0AUP1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ccdc112A0AUP1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC21.1■□□□□ 0.97
Ccdc112A0AUP1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc112A0AUP1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc112A0AUP1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms