Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv1-88A0A140T8N1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC12.25□□□□□ -0.45
Igkv1-88A0A140T8N1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv1-88A0A140T8N1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv1-88A0A140T8N1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Igkv1-88A0A140T8N1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv1-88A0A140T8N1 BC021767-201ENSMUST00000126387 1716 ntBASIC12.25□□□□□ -0.45
Igkv1-88A0A140T8N1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv1-88A0A140T8N1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv1-88A0A140T8N1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Igkv1-88A0A140T8N1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv1-88A0A140T8N1 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Igkv1-88A0A140T8N1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv1-88A0A140T8N1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv1-88A0A140T8N1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Igkv1-88A0A140T8N1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv1-88A0A140T8N1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv1-88A0A140T8N1 Gm14117-201ENSMUST00000122417 843 ntBASIC12.24□□□□□ -0.45
Igkv1-88A0A140T8N1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Igkv1-88A0A140T8N1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv1-88A0A140T8N1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC12.24□□□□□ -0.45
Igkv1-88A0A140T8N1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC12.24□□□□□ -0.45
Igkv1-88A0A140T8N1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv1-88A0A140T8N1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv1-88A0A140T8N1 Gm32699-201ENSMUST00000221728 1988 ntBASIC12.24□□□□□ -0.45
Igkv1-88A0A140T8N1 Rps24-207ENSMUST00000224568 714 ntBASIC12.24□□□□□ -0.45
Igkv1-88A0A140T8N1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv1-88A0A140T8N1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv1-88A0A140T8N1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv1-88A0A140T8N1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv1-88A0A140T8N1 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv1-88A0A140T8N1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv1-88A0A140T8N1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv1-88A0A140T8N1 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Igkv1-88A0A140T8N1 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Gm10209-201ENSMUST00000203397 1607 ntBASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv1-88A0A140T8N1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv1-88A0A140T8N1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.22□□□□□ -0.45
Igkv1-88A0A140T8N1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv1-88A0A140T8N1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv1-88A0A140T8N1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv1-88A0A140T8N1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv1-88A0A140T8N1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv1-88A0A140T8N1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv1-88A0A140T8N1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC12.22□□□□□ -0.45
Igkv1-88A0A140T8N1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC12.22□□□□□ -0.45
Igkv1-88A0A140T8N1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC12.22□□□□□ -0.45
Igkv1-88A0A140T8N1 AC124603.1-201ENSMUST00000223843 308 ntBASIC12.22□□□□□ -0.45
Igkv1-88A0A140T8N1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv1-88A0A140T8N1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Igkv1-88A0A140T8N1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv1-88A0A140T8N1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv1-88A0A140T8N1 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv1-88A0A140T8N1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv1-88A0A140T8N1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv1-88A0A140T8N1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC12.22□□□□□ -0.45
Igkv1-88A0A140T8N1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv1-88A0A140T8N1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv1-88A0A140T8N1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv1-88A0A140T8N1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv1-88A0A140T8N1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv1-88A0A140T8N1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv1-88A0A140T8N1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv1-88A0A140T8N1 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv1-88A0A140T8N1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Igkv1-88A0A140T8N1 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Igkv1-88A0A140T8N1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv1-88A0A140T8N1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv1-88A0A140T8N1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC12.21□□□□□ -0.45
Igkv1-88A0A140T8N1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv1-88A0A140T8N1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv1-88A0A140T8N1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms