Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13n-4A0A0G2JG01 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13n-4A0A0G2JG01 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15□□□□□ -0.01
Trav13n-4A0A0G2JG01 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13n-4A0A0G2JG01 Gm12933-201ENSMUST00000120203 872 ntBASIC15□□□□□ -0.01
Trav13n-4A0A0G2JG01 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15□□□□□ -0.01
Trav13n-4A0A0G2JG01 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15□□□□□ -0.01
Trav13n-4A0A0G2JG01 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13n-4A0A0G2JG01 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav13n-4A0A0G2JG01 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13n-4A0A0G2JG01 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13n-4A0A0G2JG01 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav13n-4A0A0G2JG01 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Trav13n-4A0A0G2JG01 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-4A0A0G2JG01 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-4A0A0G2JG01 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-4A0A0G2JG01 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-4A0A0G2JG01 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav13n-4A0A0G2JG01 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-4A0A0G2JG01 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-4A0A0G2JG01 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-4A0A0G2JG01 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Trav13n-4A0A0G2JG01 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-4A0A0G2JG01 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-4A0A0G2JG01 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.99□□□□□ -0.01
Trav13n-4A0A0G2JG01 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.99□□□□□ -0.01
Trav13n-4A0A0G2JG01 Gm27801-201ENSMUST00000184174 223 ntBASIC14.99□□□□□ -0.01
Trav13n-4A0A0G2JG01 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.99□□□□□ -0.01
Trav13n-4A0A0G2JG01 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-4A0A0G2JG01 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav13n-4A0A0G2JG01 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-4A0A0G2JG01 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav13n-4A0A0G2JG01 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-4A0A0G2JG01 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-4A0A0G2JG01 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Trav13n-4A0A0G2JG01 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
Trav13n-4A0A0G2JG01 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.99□□□□□ -0.01
Trav13n-4A0A0G2JG01 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-4A0A0G2JG01 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-4A0A0G2JG01 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13n-4A0A0G2JG01 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.98□□□□□ -0.01
Trav13n-4A0A0G2JG01 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13n-4A0A0G2JG01 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Trav13n-4A0A0G2JG01 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav13n-4A0A0G2JG01 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav13n-4A0A0G2JG01 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13n-4A0A0G2JG01 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Trav13n-4A0A0G2JG01 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.98□□□□□ -0.01
Trav13n-4A0A0G2JG01 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13n-4A0A0G2JG01 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13n-4A0A0G2JG01 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13n-4A0A0G2JG01 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13n-4A0A0G2JG01 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13n-4A0A0G2JG01 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav13n-4A0A0G2JG01 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13n-4A0A0G2JG01 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13n-4A0A0G2JG01 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.98□□□□□ -0.01
Trav13n-4A0A0G2JG01 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13n-4A0A0G2JG01 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13n-4A0A0G2JG01 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13n-4A0A0G2JG01 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13n-4A0A0G2JG01 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13n-4A0A0G2JG01 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13n-4A0A0G2JG01 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13n-4A0A0G2JG01 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13n-4A0A0G2JG01 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13n-4A0A0G2JG01 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13n-4A0A0G2JG01 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13n-4A0A0G2JG01 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13n-4A0A0G2JG01 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13n-4A0A0G2JG01 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13n-4A0A0G2JG01 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13n-4A0A0G2JG01 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
Trav13n-4A0A0G2JG01 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Trav13n-4A0A0G2JG01 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13n-4A0A0G2JG01 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.97□□□□□ -0.01
Trav13n-4A0A0G2JG01 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav13n-4A0A0G2JG01 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav13n-4A0A0G2JG01 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Trav13n-4A0A0G2JG01 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13n-4A0A0G2JG01 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13n-4A0A0G2JG01 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13n-4A0A0G2JG01 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13n-4A0A0G2JG01 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13n-4A0A0G2JG01 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13n-4A0A0G2JG01 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav13n-4A0A0G2JG01 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav13n-4A0A0G2JG01 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13n-4A0A0G2JG01 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13n-4A0A0G2JG01 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav13n-4A0A0G2JG01 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13n-4A0A0G2JG01 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13n-4A0A0G2JG01 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav13n-4A0A0G2JG01 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.02
Trav13n-4A0A0G2JG01 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav13n-4A0A0G2JG01 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav13n-4A0A0G2JG01 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav13n-4A0A0G2JG01 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trav13n-4A0A0G2JG01 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav13n-4A0A0G2JG01 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms