Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav13d-4A0A0G2JFX3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC12.75□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC12.75□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-4A0A0G2JFX3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-4A0A0G2JFX3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Gm7160-202ENSMUST00000188519 1027 ntBASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC12.72□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-4A0A0G2JFX3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-4A0A0G2JFX3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Gm43137-201ENSMUST00000198052 594 ntBASIC12.72□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms