Protein–RNA interactions for Protein: A0A0B4J1P5

Trbv26, T cell receptor beta, variable 26 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv26A0A0B4J1P5 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv26A0A0B4J1P5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv26A0A0B4J1P5 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv26A0A0B4J1P5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv26A0A0B4J1P5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv26A0A0B4J1P5 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv26A0A0B4J1P5 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv26A0A0B4J1P5 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv26A0A0B4J1P5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trbv26A0A0B4J1P5 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv26A0A0B4J1P5 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.42■□□□□ 0.06
Trbv26A0A0B4J1P5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.42■□□□□ 0.06
Trbv26A0A0B4J1P5 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.42■□□□□ 0.06
Trbv26A0A0B4J1P5 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv26A0A0B4J1P5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Trbv26A0A0B4J1P5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv26A0A0B4J1P5 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv26A0A0B4J1P5 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv26A0A0B4J1P5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv26A0A0B4J1P5 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv26A0A0B4J1P5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.42■□□□□ 0.06
Trbv26A0A0B4J1P5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv26A0A0B4J1P5 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.42■□□□□ 0.06
Trbv26A0A0B4J1P5 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trbv26A0A0B4J1P5 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv26A0A0B4J1P5 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trbv26A0A0B4J1P5 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv26A0A0B4J1P5 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv26A0A0B4J1P5 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv26A0A0B4J1P5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv26A0A0B4J1P5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv26A0A0B4J1P5 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.41■□□□□ 0.06
Trbv26A0A0B4J1P5 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv26A0A0B4J1P5 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trbv26A0A0B4J1P5 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.41■□□□□ 0.06
Trbv26A0A0B4J1P5 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv26A0A0B4J1P5 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv26A0A0B4J1P5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv26A0A0B4J1P5 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv26A0A0B4J1P5 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv26A0A0B4J1P5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trbv26A0A0B4J1P5 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Trbv26A0A0B4J1P5 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv26A0A0B4J1P5 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv26A0A0B4J1P5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv26A0A0B4J1P5 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv26A0A0B4J1P5 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv26A0A0B4J1P5 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv26A0A0B4J1P5 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv26A0A0B4J1P5 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv26A0A0B4J1P5 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.4■□□□□ 0.06
Trbv26A0A0B4J1P5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
Trbv26A0A0B4J1P5 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv26A0A0B4J1P5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trbv26A0A0B4J1P5 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv26A0A0B4J1P5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Trbv26A0A0B4J1P5 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv26A0A0B4J1P5 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Trbv26A0A0B4J1P5 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Trbv26A0A0B4J1P5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv26A0A0B4J1P5 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv26A0A0B4J1P5 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv26A0A0B4J1P5 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv26A0A0B4J1P5 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv26A0A0B4J1P5 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv26A0A0B4J1P5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Trbv26A0A0B4J1P5 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv26A0A0B4J1P5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trbv26A0A0B4J1P5 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.39■□□□□ 0.05
Trbv26A0A0B4J1P5 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.39■□□□□ 0.05
Trbv26A0A0B4J1P5 Gm37179-201ENSMUST00000194862 823 ntBASIC15.39■□□□□ 0.05
Trbv26A0A0B4J1P5 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv26A0A0B4J1P5 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv26A0A0B4J1P5 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv26A0A0B4J1P5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv26A0A0B4J1P5 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv26A0A0B4J1P5 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv26A0A0B4J1P5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trbv26A0A0B4J1P5 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trbv26A0A0B4J1P5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv26A0A0B4J1P5 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv26A0A0B4J1P5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv26A0A0B4J1P5 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv26A0A0B4J1P5 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv26A0A0B4J1P5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.38■□□□□ 0.05
Trbv26A0A0B4J1P5 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv26A0A0B4J1P5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv26A0A0B4J1P5 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.38■□□□□ 0.05
Trbv26A0A0B4J1P5 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.38■□□□□ 0.05
Trbv26A0A0B4J1P5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv26A0A0B4J1P5 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv26A0A0B4J1P5 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv26A0A0B4J1P5 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv26A0A0B4J1P5 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv26A0A0B4J1P5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv26A0A0B4J1P5 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv26A0A0B4J1P5 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv26A0A0B4J1P5 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.37■□□□□ 0.05
Trbv26A0A0B4J1P5 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv26A0A0B4J1P5 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms