Protein–RNA interactions for Protein: A0A0B4J1N1

C920008G01Rik, RIKEN cDNA C920008G01 gene (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C920008G01RikA0A0B4J1N1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC12.82□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC12.82□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC12.82□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC12.82□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.82□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.81□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
C920008G01RikA0A0B4J1N1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Gm45244-201ENSMUST00000211328 2200 ntBASIC12.8□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.8□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC12.79□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC12.79□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Gm5828-201ENSMUST00000071842 1860 ntBASIC12.79□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC12.79□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC12.78□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C920008G01RikA0A0B4J1N1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms