Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trbv3A0A0A6YYE2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv3A0A0A6YYE2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv3A0A0A6YYE2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv3A0A0A6YYE2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv3A0A0A6YYE2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trbv3A0A0A6YYE2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv3A0A0A6YYE2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv3A0A0A6YYE2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv3A0A0A6YYE2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv3A0A0A6YYE2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv3A0A0A6YYE2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trbv3A0A0A6YYE2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv3A0A0A6YYE2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv3A0A0A6YYE2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.3□□□□□ -0.12
Trbv3A0A0A6YYE2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trbv3A0A0A6YYE2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv3A0A0A6YYE2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trbv3A0A0A6YYE2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv3A0A0A6YYE2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv3A0A0A6YYE2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv3A0A0A6YYE2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv3A0A0A6YYE2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv3A0A0A6YYE2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv3A0A0A6YYE2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv3A0A0A6YYE2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv3A0A0A6YYE2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv3A0A0A6YYE2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv3A0A0A6YYE2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trbv3A0A0A6YYE2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trbv3A0A0A6YYE2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC14.29□□□□□ -0.12
Trbv3A0A0A6YYE2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC14.29□□□□□ -0.12
Trbv3A0A0A6YYE2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv3A0A0A6YYE2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv3A0A0A6YYE2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv3A0A0A6YYE2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trbv3A0A0A6YYE2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv3A0A0A6YYE2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv3A0A0A6YYE2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv3A0A0A6YYE2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv3A0A0A6YYE2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv3A0A0A6YYE2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv3A0A0A6YYE2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv3A0A0A6YYE2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv3A0A0A6YYE2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.28□□□□□ -0.12
Trbv3A0A0A6YYE2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.28□□□□□ -0.12
Trbv3A0A0A6YYE2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trbv3A0A0A6YYE2 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.28□□□□□ -0.12
Trbv3A0A0A6YYE2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv3A0A0A6YYE2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.28□□□□□ -0.12
Trbv3A0A0A6YYE2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv3A0A0A6YYE2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv3A0A0A6YYE2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv3A0A0A6YYE2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv3A0A0A6YYE2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv3A0A0A6YYE2 Gm5921-201ENSMUST00000075898 882 ntBASIC14.28□□□□□ -0.12
Trbv3A0A0A6YYE2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv3A0A0A6YYE2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Trbv3A0A0A6YYE2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv3A0A0A6YYE2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trbv3A0A0A6YYE2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv3A0A0A6YYE2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv3A0A0A6YYE2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv3A0A0A6YYE2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv3A0A0A6YYE2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv3A0A0A6YYE2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv3A0A0A6YYE2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv3A0A0A6YYE2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv3A0A0A6YYE2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv3A0A0A6YYE2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.27□□□□□ -0.12
Trbv3A0A0A6YYE2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv3A0A0A6YYE2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv3A0A0A6YYE2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv3A0A0A6YYE2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv3A0A0A6YYE2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Trbv3A0A0A6YYE2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.27□□□□□ -0.13
Trbv3A0A0A6YYE2 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv3A0A0A6YYE2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv3A0A0A6YYE2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv3A0A0A6YYE2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv3A0A0A6YYE2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv3A0A0A6YYE2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv3A0A0A6YYE2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv3A0A0A6YYE2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv3A0A0A6YYE2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv3A0A0A6YYE2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv3A0A0A6YYE2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv3A0A0A6YYE2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv3A0A0A6YYE2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trbv3A0A0A6YYE2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.26□□□□□ -0.13
Trbv3A0A0A6YYE2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv3A0A0A6YYE2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv3A0A0A6YYE2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv3A0A0A6YYE2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv3A0A0A6YYE2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv3A0A0A6YYE2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv3A0A0A6YYE2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv3A0A0A6YYE2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv3A0A0A6YYE2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv3A0A0A6YYE2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms