Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.99■□□□□ 0.31
Trbc1A0A0A6YWV4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trbc1A0A0A6YWV4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbc1A0A0A6YWV4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbc1A0A0A6YWV4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trbc1A0A0A6YWV4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trbc1A0A0A6YWV4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbc1A0A0A6YWV4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trbc1A0A0A6YWV4 Gm6420-201ENSMUST00000193885 723 ntBASIC16.99■□□□□ 0.31
Trbc1A0A0A6YWV4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trbc1A0A0A6YWV4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbc1A0A0A6YWV4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbc1A0A0A6YWV4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbc1A0A0A6YWV4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbc1A0A0A6YWV4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbc1A0A0A6YWV4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbc1A0A0A6YWV4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trbc1A0A0A6YWV4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbc1A0A0A6YWV4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.98■□□□□ 0.31
Trbc1A0A0A6YWV4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbc1A0A0A6YWV4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.98■□□□□ 0.31
Trbc1A0A0A6YWV4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trbc1A0A0A6YWV4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbc1A0A0A6YWV4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbc1A0A0A6YWV4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbc1A0A0A6YWV4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbc1A0A0A6YWV4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbc1A0A0A6YWV4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbc1A0A0A6YWV4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbc1A0A0A6YWV4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbc1A0A0A6YWV4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Trbc1A0A0A6YWV4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trbc1A0A0A6YWV4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trbc1A0A0A6YWV4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbc1A0A0A6YWV4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbc1A0A0A6YWV4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.97■□□□□ 0.31
Trbc1A0A0A6YWV4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbc1A0A0A6YWV4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trbc1A0A0A6YWV4 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbc1A0A0A6YWV4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbc1A0A0A6YWV4 Gm12933-201ENSMUST00000120203 872 ntBASIC16.97■□□□□ 0.31
Trbc1A0A0A6YWV4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.97■□□□□ 0.31
Trbc1A0A0A6YWV4 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.97■□□□□ 0.31
Trbc1A0A0A6YWV4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbc1A0A0A6YWV4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trbc1A0A0A6YWV4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trbc1A0A0A6YWV4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbc1A0A0A6YWV4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbc1A0A0A6YWV4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbc1A0A0A6YWV4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Trbc1A0A0A6YWV4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbc1A0A0A6YWV4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbc1A0A0A6YWV4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbc1A0A0A6YWV4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbc1A0A0A6YWV4 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.96■□□□□ 0.31
Trbc1A0A0A6YWV4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.96■□□□□ 0.31
Trbc1A0A0A6YWV4 Nespas-201ENSMUST00000143738 1083 ntBASIC16.96■□□□□ 0.31
Trbc1A0A0A6YWV4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trbc1A0A0A6YWV4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.96■□□□□ 0.31
Trbc1A0A0A6YWV4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbc1A0A0A6YWV4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Trbc1A0A0A6YWV4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbc1A0A0A6YWV4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbc1A0A0A6YWV4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbc1A0A0A6YWV4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trbc1A0A0A6YWV4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trbc1A0A0A6YWV4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbc1A0A0A6YWV4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trbc1A0A0A6YWV4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbc1A0A0A6YWV4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.95■□□□□ 0.3
Trbc1A0A0A6YWV4 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.95■□□□□ 0.3
Trbc1A0A0A6YWV4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Trbc1A0A0A6YWV4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbc1A0A0A6YWV4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbc1A0A0A6YWV4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trbc1A0A0A6YWV4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trbc1A0A0A6YWV4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbc1A0A0A6YWV4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbc1A0A0A6YWV4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbc1A0A0A6YWV4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trbc1A0A0A6YWV4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbc1A0A0A6YWV4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbc1A0A0A6YWV4 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trbc1A0A0A6YWV4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.94■□□□□ 0.3
Trbc1A0A0A6YWV4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trbc1A0A0A6YWV4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trbc1A0A0A6YWV4 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
Trbc1A0A0A6YWV4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbc1A0A0A6YWV4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.94■□□□□ 0.3
Trbc1A0A0A6YWV4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Trbc1A0A0A6YWV4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbc1A0A0A6YWV4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbc1A0A0A6YWV4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbc1A0A0A6YWV4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbc1A0A0A6YWV4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trbc1A0A0A6YWV4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbc1A0A0A6YWV4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbc1A0A0A6YWV4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbc1A0A0A6YWV4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbc1A0A0A6YWV4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms