Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv23A0A0A6YWQ1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv23A0A0A6YWQ1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv23A0A0A6YWQ1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv23A0A0A6YWQ1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv23A0A0A6YWQ1 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.91■□□□□ 0.14
Trbv23A0A0A6YWQ1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv23A0A0A6YWQ1 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv23A0A0A6YWQ1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trbv23A0A0A6YWQ1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.91■□□□□ 0.14
Trbv23A0A0A6YWQ1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv23A0A0A6YWQ1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv23A0A0A6YWQ1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv23A0A0A6YWQ1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv23A0A0A6YWQ1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv23A0A0A6YWQ1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv23A0A0A6YWQ1 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.91■□□□□ 0.14
Trbv23A0A0A6YWQ1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv23A0A0A6YWQ1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv23A0A0A6YWQ1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv23A0A0A6YWQ1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.9■□□□□ 0.14
Trbv23A0A0A6YWQ1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv23A0A0A6YWQ1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv23A0A0A6YWQ1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv23A0A0A6YWQ1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv23A0A0A6YWQ1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv23A0A0A6YWQ1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC15.9■□□□□ 0.14
Trbv23A0A0A6YWQ1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.9■□□□□ 0.14
Trbv23A0A0A6YWQ1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trbv23A0A0A6YWQ1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trbv23A0A0A6YWQ1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trbv23A0A0A6YWQ1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv23A0A0A6YWQ1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trbv23A0A0A6YWQ1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv23A0A0A6YWQ1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv23A0A0A6YWQ1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Trbv23A0A0A6YWQ1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv23A0A0A6YWQ1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv23A0A0A6YWQ1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Trbv23A0A0A6YWQ1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv23A0A0A6YWQ1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv23A0A0A6YWQ1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv23A0A0A6YWQ1 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.89■□□□□ 0.13
Trbv23A0A0A6YWQ1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv23A0A0A6YWQ1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv23A0A0A6YWQ1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv23A0A0A6YWQ1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trbv23A0A0A6YWQ1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Trbv23A0A0A6YWQ1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Trbv23A0A0A6YWQ1 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.89■□□□□ 0.13
Trbv23A0A0A6YWQ1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv23A0A0A6YWQ1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv23A0A0A6YWQ1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv23A0A0A6YWQ1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.88■□□□□ 0.13
Trbv23A0A0A6YWQ1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv23A0A0A6YWQ1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv23A0A0A6YWQ1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv23A0A0A6YWQ1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv23A0A0A6YWQ1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv23A0A0A6YWQ1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv23A0A0A6YWQ1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trbv23A0A0A6YWQ1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv23A0A0A6YWQ1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv23A0A0A6YWQ1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv23A0A0A6YWQ1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv23A0A0A6YWQ1 Gm27454-201ENSMUST00000185090 204 ntBASIC15.88■□□□□ 0.13
Trbv23A0A0A6YWQ1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv23A0A0A6YWQ1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv23A0A0A6YWQ1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv23A0A0A6YWQ1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv23A0A0A6YWQ1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.87■□□□□ 0.13
Trbv23A0A0A6YWQ1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv23A0A0A6YWQ1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv23A0A0A6YWQ1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trbv23A0A0A6YWQ1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trbv23A0A0A6YWQ1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv23A0A0A6YWQ1 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.87■□□□□ 0.13
Trbv23A0A0A6YWQ1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv23A0A0A6YWQ1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.87■□□□□ 0.13
Trbv23A0A0A6YWQ1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv23A0A0A6YWQ1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Trbv23A0A0A6YWQ1 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.87■□□□□ 0.13
Trbv23A0A0A6YWQ1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv23A0A0A6YWQ1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv23A0A0A6YWQ1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv23A0A0A6YWQ1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv23A0A0A6YWQ1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv23A0A0A6YWQ1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv23A0A0A6YWQ1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trbv23A0A0A6YWQ1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv23A0A0A6YWQ1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv23A0A0A6YWQ1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.87■□□□□ 0.13
Trbv23A0A0A6YWQ1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv23A0A0A6YWQ1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv23A0A0A6YWQ1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv23A0A0A6YWQ1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv23A0A0A6YWQ1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv23A0A0A6YWQ1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.86■□□□□ 0.13
Trbv23A0A0A6YWQ1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv23A0A0A6YWQ1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms