Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav21-dv12A0A075B6C4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav21-dv12A0A075B6C4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.25□□□□□ -0.13
Trav21-dv12A0A075B6C4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav21-dv12A0A075B6C4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav21-dv12A0A075B6C4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav21-dv12A0A075B6C4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav21-dv12A0A075B6C4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav21-dv12A0A075B6C4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav21-dv12A0A075B6C4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav21-dv12A0A075B6C4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav21-dv12A0A075B6C4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav21-dv12A0A075B6C4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.25□□□□□ -0.13
Trav21-dv12A0A075B6C4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav21-dv12A0A075B6C4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.25□□□□□ -0.13
Trav21-dv12A0A075B6C4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.25□□□□□ -0.13
Trav21-dv12A0A075B6C4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trav21-dv12A0A075B6C4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav21-dv12A0A075B6C4 Gm43060-201ENSMUST00000200621 289 ntBASIC14.25□□□□□ -0.13
Trav21-dv12A0A075B6C4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav21-dv12A0A075B6C4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav21-dv12A0A075B6C4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav21-dv12A0A075B6C4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav21-dv12A0A075B6C4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav21-dv12A0A075B6C4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav21-dv12A0A075B6C4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav21-dv12A0A075B6C4 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav21-dv12A0A075B6C4 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav21-dv12A0A075B6C4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav21-dv12A0A075B6C4 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav21-dv12A0A075B6C4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav21-dv12A0A075B6C4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav21-dv12A0A075B6C4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav21-dv12A0A075B6C4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav21-dv12A0A075B6C4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav21-dv12A0A075B6C4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav21-dv12A0A075B6C4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav21-dv12A0A075B6C4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.24□□□□□ -0.13
Trav21-dv12A0A075B6C4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav21-dv12A0A075B6C4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav21-dv12A0A075B6C4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav21-dv12A0A075B6C4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav21-dv12A0A075B6C4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav21-dv12A0A075B6C4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav21-dv12A0A075B6C4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav21-dv12A0A075B6C4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav21-dv12A0A075B6C4 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav21-dv12A0A075B6C4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav21-dv12A0A075B6C4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav21-dv12A0A075B6C4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav21-dv12A0A075B6C4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav21-dv12A0A075B6C4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav21-dv12A0A075B6C4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Trav21-dv12A0A075B6C4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav21-dv12A0A075B6C4 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav21-dv12A0A075B6C4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav21-dv12A0A075B6C4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trav21-dv12A0A075B6C4 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.23□□□□□ -0.13
Trav21-dv12A0A075B6C4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Trav21-dv12A0A075B6C4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav21-dv12A0A075B6C4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
Trav21-dv12A0A075B6C4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav21-dv12A0A075B6C4 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Trav21-dv12A0A075B6C4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav21-dv12A0A075B6C4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav21-dv12A0A075B6C4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav21-dv12A0A075B6C4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav21-dv12A0A075B6C4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav21-dv12A0A075B6C4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav21-dv12A0A075B6C4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav21-dv12A0A075B6C4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav21-dv12A0A075B6C4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav21-dv12A0A075B6C4 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav21-dv12A0A075B6C4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav21-dv12A0A075B6C4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav21-dv12A0A075B6C4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav21-dv12A0A075B6C4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav21-dv12A0A075B6C4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav21-dv12A0A075B6C4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav21-dv12A0A075B6C4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav21-dv12A0A075B6C4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.22□□□□□ -0.13
Trav21-dv12A0A075B6C4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav21-dv12A0A075B6C4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav21-dv12A0A075B6C4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav21-dv12A0A075B6C4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav21-dv12A0A075B6C4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav21-dv12A0A075B6C4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav21-dv12A0A075B6C4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav21-dv12A0A075B6C4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav21-dv12A0A075B6C4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Trav21-dv12A0A075B6C4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav21-dv12A0A075B6C4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav21-dv12A0A075B6C4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav21-dv12A0A075B6C4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav21-dv12A0A075B6C4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav21-dv12A0A075B6C4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav21-dv12A0A075B6C4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav21-dv12A0A075B6C4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav21-dv12A0A075B6C4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav21-dv12A0A075B6C4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms