Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav6d-5A0A075B6B9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-5A0A075B6B9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-5A0A075B6B9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-5A0A075B6B9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.97□□□□□ -0.01
Trav6d-5A0A075B6B9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.97□□□□□ -0.01
Trav6d-5A0A075B6B9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-5A0A075B6B9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-5A0A075B6B9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-5A0A075B6B9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-5A0A075B6B9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-5A0A075B6B9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trav6d-5A0A075B6B9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-5A0A075B6B9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-5A0A075B6B9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 Gm7860-201ENSMUST00000121190 879 ntBASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 Gm15820-201ENSMUST00000201566 728 ntBASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-5A0A075B6B9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav6d-5A0A075B6B9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav6d-5A0A075B6B9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav6d-5A0A075B6B9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav6d-5A0A075B6B9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Trav6d-5A0A075B6B9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav6d-5A0A075B6B9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-5A0A075B6B9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-5A0A075B6B9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-5A0A075B6B9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-5A0A075B6B9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav6d-5A0A075B6B9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-5A0A075B6B9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav6d-5A0A075B6B9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav6d-5A0A075B6B9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav6d-5A0A075B6B9 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.95□□□□□ -0.02
Trav6d-5A0A075B6B9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trav6d-5A0A075B6B9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.95□□□□□ -0.02
Trav6d-5A0A075B6B9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-5A0A075B6B9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-5A0A075B6B9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-5A0A075B6B9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-5A0A075B6B9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-5A0A075B6B9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-5A0A075B6B9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav6d-5A0A075B6B9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-5A0A075B6B9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav6d-5A0A075B6B9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-5A0A075B6B9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-5A0A075B6B9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Trav6d-5A0A075B6B9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-5A0A075B6B9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-5A0A075B6B9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-5A0A075B6B9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-5A0A075B6B9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC14.94□□□□□ -0.02
Trav6d-5A0A075B6B9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC14.94□□□□□ -0.02
Trav6d-5A0A075B6B9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-5A0A075B6B9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-5A0A075B6B9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav6d-5A0A075B6B9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Trav6d-5A0A075B6B9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav6d-5A0A075B6B9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
Trav6d-5A0A075B6B9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Trav6d-5A0A075B6B9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-5A0A075B6B9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.93□□□□□ -0.02
Trav6d-5A0A075B6B9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-5A0A075B6B9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-5A0A075B6B9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-5A0A075B6B9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-5A0A075B6B9 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.93□□□□□ -0.02
Trav6d-5A0A075B6B9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav6d-5A0A075B6B9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-5A0A075B6B9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-5A0A075B6B9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-5A0A075B6B9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-5A0A075B6B9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms