Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.28□□□□□ -0.12
Trav6-4A0A075B6B4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-4A0A075B6B4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav6-4A0A075B6B4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-4A0A075B6B4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-4A0A075B6B4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav6-4A0A075B6B4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav6-4A0A075B6B4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-4A0A075B6B4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-4A0A075B6B4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-4A0A075B6B4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-4A0A075B6B4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-4A0A075B6B4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-4A0A075B6B4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-4A0A075B6B4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav6-4A0A075B6B4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-4A0A075B6B4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-4A0A075B6B4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-4A0A075B6B4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-4A0A075B6B4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Trav6-4A0A075B6B4 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.27□□□□□ -0.12
Trav6-4A0A075B6B4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-4A0A075B6B4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-4A0A075B6B4 Gm10849-201ENSMUST00000100397 618 ntBASIC14.27□□□□□ -0.13
Trav6-4A0A075B6B4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.27□□□□□ -0.13
Trav6-4A0A075B6B4 Gm6420-201ENSMUST00000193885 723 ntBASIC14.27□□□□□ -0.13
Trav6-4A0A075B6B4 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.27□□□□□ -0.13
Trav6-4A0A075B6B4 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.27□□□□□ -0.13
Trav6-4A0A075B6B4 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Trav6-4A0A075B6B4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-4A0A075B6B4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav6-4A0A075B6B4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-4A0A075B6B4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-4A0A075B6B4 BC021767-201ENSMUST00000126387 1716 ntBASIC14.27□□□□□ -0.13
Trav6-4A0A075B6B4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav6-4A0A075B6B4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav6-4A0A075B6B4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav6-4A0A075B6B4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-4A0A075B6B4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-4A0A075B6B4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-4A0A075B6B4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav6-4A0A075B6B4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav6-4A0A075B6B4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-4A0A075B6B4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.26□□□□□ -0.13
Trav6-4A0A075B6B4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-4A0A075B6B4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.26□□□□□ -0.13
Trav6-4A0A075B6B4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-4A0A075B6B4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav6-4A0A075B6B4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-4A0A075B6B4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-4A0A075B6B4 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-4A0A075B6B4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-4A0A075B6B4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav6-4A0A075B6B4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav6-4A0A075B6B4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav6-4A0A075B6B4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-4A0A075B6B4 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.25□□□□□ -0.13
Trav6-4A0A075B6B4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav6-4A0A075B6B4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-4A0A075B6B4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-4A0A075B6B4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-4A0A075B6B4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-4A0A075B6B4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-4A0A075B6B4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav6-4A0A075B6B4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-4A0A075B6B4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-4A0A075B6B4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-4A0A075B6B4 Nespas-201ENSMUST00000143738 1083 ntBASIC14.25□□□□□ -0.13
Trav6-4A0A075B6B4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-4A0A075B6B4 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav6-4A0A075B6B4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-4A0A075B6B4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-4A0A075B6B4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav6-4A0A075B6B4 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-4A0A075B6B4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-4A0A075B6B4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-4A0A075B6B4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-4A0A075B6B4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-4A0A075B6B4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav6-4A0A075B6B4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-4A0A075B6B4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-4A0A075B6B4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-4A0A075B6B4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-4A0A075B6B4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-4A0A075B6B4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-4A0A075B6B4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav6-4A0A075B6B4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.24□□□□□ -0.13
Trav6-4A0A075B6B4 Gm27405-201ENSMUST00000184201 112 ntBASIC14.24□□□□□ -0.13
Trav6-4A0A075B6B4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-4A0A075B6B4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-4A0A075B6B4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-4A0A075B6B4 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-4A0A075B6B4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav6-4A0A075B6B4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav6-4A0A075B6B4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-4A0A075B6B4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav6-4A0A075B6B4 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.23□□□□□ -0.13
Trav6-4A0A075B6B4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav6-4A0A075B6B4 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-4A0A075B6B4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms