Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav6n-6A0A075B6B2 Gm7160-202ENSMUST00000188519 1027 ntBASIC13.79□□□□□ -0.2
Trav6n-6A0A075B6B2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav6n-6A0A075B6B2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav6n-6A0A075B6B2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6n-6A0A075B6B2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6n-6A0A075B6B2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6n-6A0A075B6B2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6n-6A0A075B6B2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6n-6A0A075B6B2 Gm27045-201ENSMUST00000182145 1402 ntBASIC13.79□□□□□ -0.2
Trav6n-6A0A075B6B2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav6n-6A0A075B6B2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6n-6A0A075B6B2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6n-6A0A075B6B2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6n-6A0A075B6B2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6n-6A0A075B6B2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6n-6A0A075B6B2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
Trav6n-6A0A075B6B2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6n-6A0A075B6B2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6n-6A0A075B6B2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6n-6A0A075B6B2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trav6n-6A0A075B6B2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6n-6A0A075B6B2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6n-6A0A075B6B2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6n-6A0A075B6B2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC13.78□□□□□ -0.2
Trav6n-6A0A075B6B2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6n-6A0A075B6B2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6n-6A0A075B6B2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6n-6A0A075B6B2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6n-6A0A075B6B2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6n-6A0A075B6B2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6n-6A0A075B6B2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6n-6A0A075B6B2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6n-6A0A075B6B2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trav6n-6A0A075B6B2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Trav6n-6A0A075B6B2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trav6n-6A0A075B6B2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trav6n-6A0A075B6B2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6n-6A0A075B6B2 Gm27454-201ENSMUST00000185090 204 ntBASIC13.77□□□□□ -0.21
Trav6n-6A0A075B6B2 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.77□□□□□ -0.21
Trav6n-6A0A075B6B2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6n-6A0A075B6B2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC13.77□□□□□ -0.21
Trav6n-6A0A075B6B2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6n-6A0A075B6B2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6n-6A0A075B6B2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6n-6A0A075B6B2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6n-6A0A075B6B2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6n-6A0A075B6B2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6n-6A0A075B6B2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6n-6A0A075B6B2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6n-6A0A075B6B2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6n-6A0A075B6B2 Gm6598-201ENSMUST00000202719 2615 ntBASIC13.77□□□□□ -0.21
Trav6n-6A0A075B6B2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6n-6A0A075B6B2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6n-6A0A075B6B2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC13.76□□□□□ -0.21
Trav6n-6A0A075B6B2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6n-6A0A075B6B2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6n-6A0A075B6B2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6n-6A0A075B6B2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6n-6A0A075B6B2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6n-6A0A075B6B2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav6n-6A0A075B6B2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6n-6A0A075B6B2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6n-6A0A075B6B2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trav6n-6A0A075B6B2 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6n-6A0A075B6B2 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.76□□□□□ -0.21
Trav6n-6A0A075B6B2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6n-6A0A075B6B2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6n-6A0A075B6B2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6n-6A0A075B6B2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav6n-6A0A075B6B2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav6n-6A0A075B6B2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6n-6A0A075B6B2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6n-6A0A075B6B2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6n-6A0A075B6B2 Gm10209-201ENSMUST00000203397 1607 ntBASIC13.75□□□□□ -0.21
Trav6n-6A0A075B6B2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6n-6A0A075B6B2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6n-6A0A075B6B2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav6n-6A0A075B6B2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC13.75□□□□□ -0.21
Trav6n-6A0A075B6B2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6n-6A0A075B6B2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6n-6A0A075B6B2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav6n-6A0A075B6B2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav6n-6A0A075B6B2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Trav6n-6A0A075B6B2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Trav6n-6A0A075B6B2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6n-6A0A075B6B2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav6n-6A0A075B6B2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6n-6A0A075B6B2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6n-6A0A075B6B2 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.75□□□□□ -0.21
Trav6n-6A0A075B6B2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav6n-6A0A075B6B2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6n-6A0A075B6B2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6n-6A0A075B6B2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6n-6A0A075B6B2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trav6n-6A0A075B6B2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav6n-6A0A075B6B2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6n-6A0A075B6B2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6n-6A0A075B6B2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6n-6A0A075B6B2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms