Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Gm42778-201ENSMUST00000199644 553 ntBASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-7A0A075B6B0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-7A0A075B6B0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-7A0A075B6B0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-7A0A075B6B0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-7A0A075B6B0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.3□□□□□ -0.12
Trav6d-7A0A075B6B0 Gm42642-201ENSMUST00000200683 355 ntBASIC14.3□□□□□ -0.12
Trav6d-7A0A075B6B0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-7A0A075B6B0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.3□□□□□ -0.12
Trav6d-7A0A075B6B0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-7A0A075B6B0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-7A0A075B6B0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-7A0A075B6B0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trav6d-7A0A075B6B0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.3□□□□□ -0.12
Trav6d-7A0A075B6B0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav6d-7A0A075B6B0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Trav6d-7A0A075B6B0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-7A0A075B6B0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-7A0A075B6B0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-7A0A075B6B0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-7A0A075B6B0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav6d-7A0A075B6B0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-7A0A075B6B0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-7A0A075B6B0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav6d-7A0A075B6B0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-7A0A075B6B0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-7A0A075B6B0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-7A0A075B6B0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav6d-7A0A075B6B0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-7A0A075B6B0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
Trav6d-7A0A075B6B0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-7A0A075B6B0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-7A0A075B6B0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-7A0A075B6B0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-7A0A075B6B0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav6d-7A0A075B6B0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-7A0A075B6B0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav6d-7A0A075B6B0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-7A0A075B6B0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav6d-7A0A075B6B0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-7A0A075B6B0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-7A0A075B6B0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-7A0A075B6B0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-7A0A075B6B0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-7A0A075B6B0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Trav6d-7A0A075B6B0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-7A0A075B6B0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav6d-7A0A075B6B0 Gm42569-201ENSMUST00000200539 472 ntBASIC14.28□□□□□ -0.12
Trav6d-7A0A075B6B0 Gm18671-201ENSMUST00000214826 683 ntBASIC14.28□□□□□ -0.12
Trav6d-7A0A075B6B0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.28□□□□□ -0.12
Trav6d-7A0A075B6B0 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.28□□□□□ -0.12
Trav6d-7A0A075B6B0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-7A0A075B6B0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-7A0A075B6B0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-7A0A075B6B0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-7A0A075B6B0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-7A0A075B6B0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-7A0A075B6B0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-7A0A075B6B0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-7A0A075B6B0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-7A0A075B6B0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6d-7A0A075B6B0 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.27□□□□□ -0.12
Trav6d-7A0A075B6B0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6d-7A0A075B6B0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6d-7A0A075B6B0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6d-7A0A075B6B0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6d-7A0A075B6B0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Trav6d-7A0A075B6B0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Trav6d-7A0A075B6B0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6d-7A0A075B6B0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-7A0A075B6B0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.27□□□□□ -0.13
Trav6d-7A0A075B6B0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms