Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav18A0A075B656 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Trav18A0A075B656 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav18A0A075B656 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav18A0A075B656 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav18A0A075B656 Gm43017-201ENSMUST00000198296 752 ntBASIC15.18■□□□□ 0.02
Trav18A0A075B656 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav18A0A075B656 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav18A0A075B656 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav18A0A075B656 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav18A0A075B656 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav18A0A075B656 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav18A0A075B656 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav18A0A075B656 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav18A0A075B656 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav18A0A075B656 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav18A0A075B656 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav18A0A075B656 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav18A0A075B656 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav18A0A075B656 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav18A0A075B656 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav18A0A075B656 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav18A0A075B656 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav18A0A075B656 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav18A0A075B656 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav18A0A075B656 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav18A0A075B656 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.17■□□□□ 0.02
Trav18A0A075B656 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Trav18A0A075B656 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav18A0A075B656 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
Trav18A0A075B656 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav18A0A075B656 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav18A0A075B656 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav18A0A075B656 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav18A0A075B656 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav18A0A075B656 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav18A0A075B656 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav18A0A075B656 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav18A0A075B656 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav18A0A075B656 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav18A0A075B656 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Trav18A0A075B656 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav18A0A075B656 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav18A0A075B656 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav18A0A075B656 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav18A0A075B656 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.16■□□□□ 0.02
Trav18A0A075B656 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav18A0A075B656 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav18A0A075B656 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav18A0A075B656 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav18A0A075B656 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav18A0A075B656 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav18A0A075B656 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav18A0A075B656 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav18A0A075B656 Gm38205-201ENSMUST00000192243 258 ntBASIC15.16■□□□□ 0.02
Trav18A0A075B656 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav18A0A075B656 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav18A0A075B656 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav18A0A075B656 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav18A0A075B656 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav18A0A075B656 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav18A0A075B656 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.16■□□□□ 0.02
Trav18A0A075B656 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav18A0A075B656 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav18A0A075B656 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav18A0A075B656 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav18A0A075B656 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav18A0A075B656 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav18A0A075B656 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav18A0A075B656 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav18A0A075B656 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav18A0A075B656 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav18A0A075B656 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav18A0A075B656 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav18A0A075B656 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav18A0A075B656 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav18A0A075B656 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav18A0A075B656 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav18A0A075B656 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav18A0A075B656 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.15■□□□□ 0.02
Trav18A0A075B656 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav18A0A075B656 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Trav18A0A075B656 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav18A0A075B656 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav18A0A075B656 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav18A0A075B656 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav18A0A075B656 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav18A0A075B656 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.15■□□□□ 0.02
Trav18A0A075B656 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.15■□□□□ 0.02
Trav18A0A075B656 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav18A0A075B656 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav18A0A075B656 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav18A0A075B656 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav18A0A075B656 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav18A0A075B656 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav18A0A075B656 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.14■□□□□ 0.01
Trav18A0A075B656 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav18A0A075B656 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav18A0A075B656 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav18A0A075B656 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms