Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8-1A0A075B641 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8-1A0A075B641 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8-1A0A075B641 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8-1A0A075B641 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav8-1A0A075B641 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8-1A0A075B641 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav8-1A0A075B641 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8-1A0A075B641 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8-1A0A075B641 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8-1A0A075B641 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8-1A0A075B641 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8-1A0A075B641 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav8-1A0A075B641 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav8-1A0A075B641 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav8-1A0A075B641 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8-1A0A075B641 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8-1A0A075B641 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8-1A0A075B641 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav8-1A0A075B641 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8-1A0A075B641 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.31□□□□□ -0.28
Trav8-1A0A075B641 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav8-1A0A075B641 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav8-1A0A075B641 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8-1A0A075B641 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8-1A0A075B641 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8-1A0A075B641 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8-1A0A075B641 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8-1A0A075B641 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8-1A0A075B641 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8-1A0A075B641 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8-1A0A075B641 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav8-1A0A075B641 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8-1A0A075B641 Mir6538-201ENSMUST00000183713 110 ntBASIC13.3□□□□□ -0.28
Trav8-1A0A075B641 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav8-1A0A075B641 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav8-1A0A075B641 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC13.3□□□□□ -0.28
Trav8-1A0A075B641 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8-1A0A075B641 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8-1A0A075B641 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8-1A0A075B641 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8-1A0A075B641 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8-1A0A075B641 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8-1A0A075B641 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8-1A0A075B641 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Trav8-1A0A075B641 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8-1A0A075B641 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8-1A0A075B641 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8-1A0A075B641 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav8-1A0A075B641 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8-1A0A075B641 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8-1A0A075B641 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav8-1A0A075B641 AC123834.2-201ENSMUST00000224038 2340 ntBASIC13.29□□□□□ -0.28
Trav8-1A0A075B641 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8-1A0A075B641 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav8-1A0A075B641 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8-1A0A075B641 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8-1A0A075B641 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8-1A0A075B641 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8-1A0A075B641 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8-1A0A075B641 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8-1A0A075B641 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8-1A0A075B641 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav8-1A0A075B641 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav8-1A0A075B641 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8-1A0A075B641 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8-1A0A075B641 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8-1A0A075B641 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC13.28□□□□□ -0.28
Trav8-1A0A075B641 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8-1A0A075B641 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav8-1A0A075B641 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav8-1A0A075B641 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8-1A0A075B641 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8-1A0A075B641 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8-1A0A075B641 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8-1A0A075B641 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav8-1A0A075B641 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
Trav8-1A0A075B641 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8-1A0A075B641 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8-1A0A075B641 Gm10620-201ENSMUST00000098379 1332 ntBASIC13.28□□□□□ -0.28
Trav8-1A0A075B641 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8-1A0A075B641 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8-1A0A075B641 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav8-1A0A075B641 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8-1A0A075B641 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8-1A0A075B641 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8-1A0A075B641 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav8-1A0A075B641 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8-1A0A075B641 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trav8-1A0A075B641 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trav8-1A0A075B641 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav8-1A0A075B641 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav8-1A0A075B641 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav8-1A0A075B641 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav8-1A0A075B641 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav8-1A0A075B641 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav8-1A0A075B641 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav8-1A0A075B641 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav8-1A0A075B641 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav8-1A0A075B641 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms