Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7-6A0A075B640 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7-6A0A075B640 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trav7-6A0A075B640 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7-6A0A075B640 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7-6A0A075B640 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7-6A0A075B640 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7-6A0A075B640 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7-6A0A075B640 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7-6A0A075B640 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav7-6A0A075B640 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7-6A0A075B640 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7-6A0A075B640 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav7-6A0A075B640 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav7-6A0A075B640 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7-6A0A075B640 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7-6A0A075B640 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7-6A0A075B640 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7-6A0A075B640 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7-6A0A075B640 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7-6A0A075B640 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7-6A0A075B640 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7-6A0A075B640 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 Gm43137-201ENSMUST00000198052 594 ntBASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 Spcs1-204ENSMUST00000226782 949 ntBASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 Gm18688-201ENSMUST00000204695 1859 ntBASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 Gm37352-201ENSMUST00000193908 2181 ntBASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7-6A0A075B640 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7-6A0A075B640 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7-6A0A075B640 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7-6A0A075B640 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7-6A0A075B640 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav7-6A0A075B640 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7-6A0A075B640 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7-6A0A075B640 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7-6A0A075B640 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7-6A0A075B640 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7-6A0A075B640 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Trav7-6A0A075B640 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav7-6A0A075B640 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav7-6A0A075B640 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav7-6A0A075B640 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7-6A0A075B640 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav7-6A0A075B640 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7-6A0A075B640 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7-6A0A075B640 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav7-6A0A075B640 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7-6A0A075B640 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav7-6A0A075B640 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7-6A0A075B640 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7-6A0A075B640 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav7-6A0A075B640 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav7-6A0A075B640 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7-6A0A075B640 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7-6A0A075B640 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav7-6A0A075B640 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7-6A0A075B640 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7-6A0A075B640 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7-6A0A075B640 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7-6A0A075B640 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Trav7-6A0A075B640 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7-6A0A075B640 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7-6A0A075B640 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7-6A0A075B640 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7-6A0A075B640 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav7-6A0A075B640 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7-6A0A075B640 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7-6A0A075B640 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Trav7-6A0A075B640 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7-6A0A075B640 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7-6A0A075B640 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav7-6A0A075B640 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7-6A0A075B640 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7-6A0A075B640 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7-6A0A075B640 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7-6A0A075B640 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7-6A0A075B640 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms