Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.77■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.77■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.75■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.75■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.75■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.75■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.75■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.74■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Gm7860-201ENSMUST00000121190 879 ntBASIC15.73■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.73■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.73■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms