Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav13d-1A0A075B606 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-1A0A075B606 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-1A0A075B606 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-1A0A075B606 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-1A0A075B606 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-1A0A075B606 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-1A0A075B606 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav13d-1A0A075B606 Gm13534-201ENSMUST00000121169 513 ntBASIC13.55□□□□□ -0.24
Trav13d-1A0A075B606 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav13d-1A0A075B606 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-1A0A075B606 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.55□□□□□ -0.24
Trav13d-1A0A075B606 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-1A0A075B606 Gm6365-201ENSMUST00000054711 744 ntBASIC13.55□□□□□ -0.24
Trav13d-1A0A075B606 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav13d-1A0A075B606 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav13d-1A0A075B606 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-1A0A075B606 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-1A0A075B606 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-1A0A075B606 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-1A0A075B606 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
Trav13d-1A0A075B606 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.55□□□□□ -0.24
Trav13d-1A0A075B606 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-1A0A075B606 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-1A0A075B606 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-1A0A075B606 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.54□□□□□ -0.24
Trav13d-1A0A075B606 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-1A0A075B606 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav13d-1A0A075B606 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-1A0A075B606 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Trav13d-1A0A075B606 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-1A0A075B606 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-1A0A075B606 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav13d-1A0A075B606 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-1A0A075B606 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-1A0A075B606 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-1A0A075B606 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Gm7290-201ENSMUST00000104990 617 ntBASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Gm12918-201ENSMUST00000120234 636 ntBASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Gm15710-201ENSMUST00000121821 636 ntBASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Gm27011-201ENSMUST00000182352 972 ntBASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Gm5075-201ENSMUST00000196916 622 ntBASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-1A0A075B606 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav13d-1A0A075B606 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trav13d-1A0A075B606 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav13d-1A0A075B606 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav13d-1A0A075B606 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav13d-1A0A075B606 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav13d-1A0A075B606 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-1A0A075B606 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.52□□□□□ -0.25
Trav13d-1A0A075B606 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-1A0A075B606 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trav13d-1A0A075B606 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-1A0A075B606 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.52□□□□□ -0.25
Trav13d-1A0A075B606 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.52□□□□□ -0.25
Trav13d-1A0A075B606 Gm5408-201ENSMUST00000197998 747 ntBASIC13.52□□□□□ -0.25
Trav13d-1A0A075B606 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-1A0A075B606 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trav13d-1A0A075B606 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-1A0A075B606 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-1A0A075B606 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-1A0A075B606 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-1A0A075B606 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-1A0A075B606 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-1A0A075B606 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-1A0A075B606 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-1A0A075B606 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-1A0A075B606 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-1A0A075B606 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-1A0A075B606 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trav13d-1A0A075B606 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-1A0A075B606 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-1A0A075B606 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-1A0A075B606 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-1A0A075B606 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav13d-1A0A075B606 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms