Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.61■□□□□ 0.57
Trbv4A0A075B5I2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv4A0A075B5I2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.61■□□□□ 0.57
Trbv4A0A075B5I2 Gm10033-202ENSMUST00000211874 928 ntBASIC18.61■□□□□ 0.57
Trbv4A0A075B5I2 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.61■□□□□ 0.57
Trbv4A0A075B5I2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv4A0A075B5I2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv4A0A075B5I2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv4A0A075B5I2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Trbv4A0A075B5I2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv4A0A075B5I2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv4A0A075B5I2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv4A0A075B5I2 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.6■□□□□ 0.57
Trbv4A0A075B5I2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv4A0A075B5I2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Trbv4A0A075B5I2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.6■□□□□ 0.57
Trbv4A0A075B5I2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv4A0A075B5I2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv4A0A075B5I2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv4A0A075B5I2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv4A0A075B5I2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv4A0A075B5I2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.59■□□□□ 0.57
Trbv4A0A075B5I2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Trbv4A0A075B5I2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv4A0A075B5I2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv4A0A075B5I2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv4A0A075B5I2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv4A0A075B5I2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv4A0A075B5I2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv4A0A075B5I2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv4A0A075B5I2 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.59■□□□□ 0.57
Trbv4A0A075B5I2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trbv4A0A075B5I2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.59■□□□□ 0.57
Trbv4A0A075B5I2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.59■□□□□ 0.57
Trbv4A0A075B5I2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Trbv4A0A075B5I2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv4A0A075B5I2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv4A0A075B5I2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Trbv4A0A075B5I2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Trbv4A0A075B5I2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trbv4A0A075B5I2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trbv4A0A075B5I2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trbv4A0A075B5I2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trbv4A0A075B5I2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trbv4A0A075B5I2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trbv4A0A075B5I2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trbv4A0A075B5I2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Trbv4A0A075B5I2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv4A0A075B5I2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv4A0A075B5I2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trbv4A0A075B5I2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv4A0A075B5I2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trbv4A0A075B5I2 Gm5874-201ENSMUST00000096101 508 ntBASIC18.57■□□□□ 0.56
Trbv4A0A075B5I2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv4A0A075B5I2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv4A0A075B5I2 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv4A0A075B5I2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv4A0A075B5I2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv4A0A075B5I2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv4A0A075B5I2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv4A0A075B5I2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv4A0A075B5I2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv4A0A075B5I2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv4A0A075B5I2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv4A0A075B5I2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv4A0A075B5I2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv4A0A075B5I2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv4A0A075B5I2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.56■□□□□ 0.56
Trbv4A0A075B5I2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv4A0A075B5I2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.56■□□□□ 0.56
Trbv4A0A075B5I2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv4A0A075B5I2 Gm6420-201ENSMUST00000193885 723 ntBASIC18.56■□□□□ 0.56
Trbv4A0A075B5I2 Gm42642-201ENSMUST00000200683 355 ntBASIC18.56■□□□□ 0.56
Trbv4A0A075B5I2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.56■□□□□ 0.56
Trbv4A0A075B5I2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv4A0A075B5I2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv4A0A075B5I2 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.56■□□□□ 0.56
Trbv4A0A075B5I2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv4A0A075B5I2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv4A0A075B5I2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.56■□□□□ 0.56
Trbv4A0A075B5I2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.56■□□□□ 0.56
Trbv4A0A075B5I2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv4A0A075B5I2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv4A0A075B5I2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv4A0A075B5I2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trbv4A0A075B5I2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv4A0A075B5I2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Trbv4A0A075B5I2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv4A0A075B5I2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv4A0A075B5I2 Gm18671-201ENSMUST00000214826 683 ntBASIC18.55■□□□□ 0.56
Trbv4A0A075B5I2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.55■□□□□ 0.56
Trbv4A0A075B5I2 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.55■□□□□ 0.56
Trbv4A0A075B5I2 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.55■□□□□ 0.56
Trbv4A0A075B5I2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv4A0A075B5I2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv4A0A075B5I2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv4A0A075B5I2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv4A0A075B5I2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv4A0A075B5I2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv4A0A075B5I2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms