Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col8a1Q00780 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col8a1Q00780 Msh4-205ENSMUST00000190449 3110 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col8a1Q00780 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC6.87□□□□□ -1.31
Col8a1Q00780 Bgn-201ENSMUST00000033741 2419 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col8a1Q00780 AC120425.1-201ENSMUST00000225213 2360 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC6.87□□□□□ -1.31
Col8a1Q00780 AC120163.1-201ENSMUST00000228618 1680 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 Ugt1a6b-202ENSMUST00000113138 2303 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Col8a1Q00780 Ube4bos1-201ENSMUST00000141259 2227 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Col8a1Q00780 Sorbs1-202ENSMUST00000099467 2817 ntAPPRIS P4 TSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Fmr1-206ENSMUST00000114657 4076 ntTSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm28485-201ENSMUST00000185300 1500 ntTSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm28684-201ENSMUST00000185586 1500 ntTSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm28422-201ENSMUST00000186112 1500 ntTSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm29447-201ENSMUST00000186407 1500 ntTSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm29628-201ENSMUST00000187206 1500 ntTSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm28316-201ENSMUST00000187576 1500 ntTSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm29313-201ENSMUST00000187866 1500 ntTSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm28252-201ENSMUST00000188457 1500 ntTSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm28950-203ENSMUST00000188826 1500 ntTSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm29303-201ENSMUST00000189215 1500 ntTSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm28220-201ENSMUST00000189607 1500 ntTSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm29342-202ENSMUST00000189689 1500 ntTSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm29116-202ENSMUST00000189963 1500 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm29081-203ENSMUST00000190140 1500 ntTSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm28726-201ENSMUST00000190994 1500 ntTSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm29386-203ENSMUST00000191185 1500 ntTSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm33954-202ENSMUST00000195188 1500 ntTSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Lmx1a-201ENSMUST00000028003 3347 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col8a1Q00780 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm1988-201ENSMUST00000188190 2565 ntBASIC6.86□□□□□ -1.31
Col8a1Q00780 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col8a1Q00780 Tsnaxip1-203ENSMUST00000212566 1993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col8a1Q00780 Atp6v1a-202ENSMUST00000114666 4234 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col8a1Q00780 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm12430-201ENSMUST00000121539 1322 ntBASIC6.86□□□□□ -1.31
Col8a1Q00780 Lrrc28-201ENSMUST00000032775 1817 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm38249-201ENSMUST00000192560 2321 ntBASIC6.86□□□□□ -1.31
Col8a1Q00780 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm11320-201ENSMUST00000119434 463 ntBASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm11653-201ENSMUST00000119992 1009 ntBASIC6.86□□□□□ -1.31
Col8a1Q00780 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm13548-201ENSMUST00000144688 385 ntBASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm24782-201ENSMUST00000157641 132 ntBASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm6264-201ENSMUST00000160802 624 ntBASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm16103-201ENSMUST00000163003 1279 ntBASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm18779-201ENSMUST00000173444 577 ntBASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm8167-201ENSMUST00000183320 958 ntBASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm29663-201ENSMUST00000186962 853 ntBASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm37708-201ENSMUST00000192337 895 ntBASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm37920-201ENSMUST00000192952 749 ntBASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm42667-201ENSMUST00000196132 234 ntBASIC6.86□□□□□ -1.31
Col8a1Q00780 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC6.86□□□□□ -1.31
Col8a1Q00780 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC6.86□□□□□ -1.31
Col8a1Q00780 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Col8a1Q00780 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm34418-201ENSMUST00000212879 309 ntTSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Col8a1Q00780 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col8a1Q00780 AC154849.1-201ENSMUST00000224873 960 ntBASIC6.86□□□□□ -1.31
Col8a1Q00780 Diaph3-204ENSMUST00000226254 682 ntBASIC6.86□□□□□ -1.31
Col8a1Q00780 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col8a1Q00780 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Olfr24-201ENSMUST00000066997 1157 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm8362-201ENSMUST00000168790 1762 ntAPPRIS P5 TSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm45821-201ENSMUST00000211967 1757 ntTSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Hcar1-201ENSMUST00000164267 3285 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm36120-201ENSMUST00000214393 1734 ntTSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Prr14-202ENSMUST00000106292 2175 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Tmcc1-209ENSMUST00000173548 1622 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col8a1Q00780 Selenop-203ENSMUST00000159216 2085 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Sec23a-204ENSMUST00000165134 2529 ntTSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Ogdhl-201ENSMUST00000022480 3449 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Nqo1-201ENSMUST00000003947 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col8a1Q00780 Pkib-201ENSMUST00000066028 1552 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col8a1Q00780 Rpgr-203ENSMUST00000073392 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col8a1Q00780 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC6.86□□□□□ -1.31
Col8a1Q00780 Vnn1-201ENSMUST00000041416 2416 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col8a1Q00780 Rbm6-ps2-201ENSMUST00000186440 1534 ntBASIC6.86□□□□□ -1.31
Col8a1Q00780 Gatad2b-201ENSMUST00000049382 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col8a1Q00780 Gm43890-201ENSMUST00000203437 2799 ntBASIC6.86□□□□□ -1.31
Col8a1Q00780 Kin-201ENSMUST00000042512 1472 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Iars-201ENSMUST00000047363 4396 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Col8a1Q00780 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC6.85□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms