Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC8.3□□□□□ -1.08
Tpm1P58771 Gm43623-201ENSMUST00000199289 2663 ntBASIC8.3□□□□□ -1.08
Tpm1P58771 Psg-ps1-201ENSMUST00000165490 1574 ntBASIC8.3□□□□□ -1.08
Tpm1P58771 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Tpm1P58771 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Tpm1P58771 Gm45358-201ENSMUST00000209492 2305 ntBASIC8.3□□□□□ -1.08
Tpm1P58771 Tespa1-201ENSMUST00000042586 1663 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Tpm1P58771 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Tpm1P58771 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC8.29□□□□□ -1.08
Tpm1P58771 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Tpm1P58771 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Tpm1P58771 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Tpm1P58771 Gm44116-201ENSMUST00000204269 1525 ntBASIC8.29□□□□□ -1.08
Tpm1P58771 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Tpm1P58771 CT009757.6-201ENSMUST00000220661 2312 ntBASIC8.29□□□□□ -1.08
Tpm1P58771 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Tpm1P58771 Gm14380-201ENSMUST00000122298 431 ntBASIC8.29□□□□□ -1.08
Tpm1P58771 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Tpm1P58771 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC8.29□□□□□ -1.08
Tpm1P58771 Mir1983-201ENSMUST00000157523 132 ntBASIC8.29□□□□□ -1.08
Tpm1P58771 Gm22424-201ENSMUST00000158527 87 ntBASIC8.29□□□□□ -1.08
Tpm1P58771 Gm20491-201ENSMUST00000173765 1241 ntBASIC8.29□□□□□ -1.08
Tpm1P58771 Gm23945-201ENSMUST00000179609 92 ntBASIC8.29□□□□□ -1.08
Tpm1P58771 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC8.29□□□□□ -1.08
Tpm1P58771 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC8.29□□□□□ -1.08
Tpm1P58771 Gm9423-201ENSMUST00000183173 997 ntBASIC8.29□□□□□ -1.08
Tpm1P58771 Gm18699-201ENSMUST00000190713 243 ntBASIC8.29□□□□□ -1.08
Tpm1P58771 Gm18995-201ENSMUST00000202981 520 ntBASIC8.29□□□□□ -1.08
Tpm1P58771 Gm6312-201ENSMUST00000204060 1194 ntBASIC8.29□□□□□ -1.08
Tpm1P58771 Gm7210-201ENSMUST00000209309 1067 ntBASIC8.29□□□□□ -1.08
Tpm1P58771 Gm39662-201ENSMUST00000211909 1227 ntTSL 5 BASIC8.29□□□□□ -1.08
Tpm1P58771 Gm18972-201ENSMUST00000218873 630 ntBASIC8.29□□□□□ -1.08
Tpm1P58771 Gm9249-201ENSMUST00000221420 578 ntBASIC8.29□□□□□ -1.08
Tpm1P58771 Gm46379-201ENSMUST00000222551 265 ntBASIC8.29□□□□□ -1.08
Tpm1P58771 CT010480.3-201ENSMUST00000224712 259 ntBASIC8.29□□□□□ -1.08
Tpm1P58771 CT009550.3-201ENSMUST00000228542 455 ntBASIC8.29□□□□□ -1.08
Tpm1P58771 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Tpm1P58771 Olfr51-201ENSMUST00000076514 924 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Tpm1P58771 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Tpm1P58771 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Tpm1P58771 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Tpm1P58771 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC8.29□□□□□ -1.08
Tpm1P58771 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Tpm1P58771 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Tpm1P58771 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Tpm1P58771 Vmn2r-ps95-201ENSMUST00000222423 2316 ntBASIC8.29□□□□□ -1.08
Tpm1P58771 AC154270.2-201ENSMUST00000226755 2306 ntBASIC8.29□□□□□ -1.08
Tpm1P58771 Gm43792-201ENSMUST00000202492 2210 ntBASIC8.29□□□□□ -1.08
Tpm1P58771 Gm18957-201ENSMUST00000197623 1813 ntBASIC8.29□□□□□ -1.08
Tpm1P58771 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Tpm1P58771 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Tpm1P58771 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Tpm1P58771 AC160863.4-201ENSMUST00000218099 1334 ntTSL 5 BASIC8.29□□□□□ -1.08
Tpm1P58771 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Tpm1P58771 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC8.28□□□□□ -1.08
Tpm1P58771 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Tpm1P58771 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC8.28□□□□□ -1.08
Tpm1P58771 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Tpm1P58771 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Tpm1P58771 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Tpm1P58771 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Tpm1P58771 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Tpm1P58771 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Tpm1P58771 4930455G09Rik-201ENSMUST00000126231 630 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Tpm1P58771 Bnip1-206ENSMUST00000135824 629 ntTSL 5 BASIC8.28□□□□□ -1.08
Tpm1P58771 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC8.28□□□□□ -1.08
Tpm1P58771 Gm15324-201ENSMUST00000139397 355 ntTSL 2 BASIC8.28□□□□□ -1.08
Tpm1P58771 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC8.28□□□□□ -1.08
Tpm1P58771 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC8.28□□□□□ -1.08
Tpm1P58771 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC8.28□□□□□ -1.08
Tpm1P58771 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Tpm1P58771 Scgb2b30-201ENSMUST00000187013 336 ntBASIC8.28□□□□□ -1.08
Tpm1P58771 Scgb2b10-201ENSMUST00000191403 318 ntBASIC8.28□□□□□ -1.08
Tpm1P58771 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC8.28□□□□□ -1.08
Tpm1P58771 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC8.28□□□□□ -1.08
Tpm1P58771 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Tpm1P58771 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Tpm1P58771 Gm8058-201ENSMUST00000217247 587 ntBASIC8.28□□□□□ -1.08
Tpm1P58771 Cox8c-201ENSMUST00000053611 458 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Tpm1P58771 Rps7-201ENSMUST00000074267 954 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Tpm1P58771 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Tpm1P58771 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC8.28□□□□□ -1.08
Tpm1P58771 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Tpm1P58771 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Tpm1P58771 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC8.28□□□□□ -1.08
Tpm1P58771 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Tpm1P58771 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Tpm1P58771 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Tpm1P58771 Gm45250-201ENSMUST00000209414 3592 ntBASIC8.28□□□□□ -1.08
Tpm1P58771 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Tpm1P58771 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Tpm1P58771 Gm43279-201ENSMUST00000202376 2512 ntBASIC8.28□□□□□ -1.08
Tpm1P58771 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Tpm1P58771 Gm44185-201ENSMUST00000204539 3307 ntBASIC8.28□□□□□ -1.08
Tpm1P58771 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Tpm1P58771 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC8.27□□□□□ -1.08
Tpm1P58771 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Tpm1P58771 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.08
Tpm1P58771 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Tpm1P58771 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms