Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Shmt1P50431 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Shmt1P50431 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Shmt1P50431 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Shmt1P50431 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Shmt1P50431 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Shmt1P50431 Gm19031-201ENSMUST00000176280 1365 ntBASIC8.07□□□□□ -1.12
Shmt1P50431 Gm37200-201ENSMUST00000193689 2172 ntBASIC8.07□□□□□ -1.12
Shmt1P50431 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Shmt1P50431 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Shmt1P50431 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Shmt1P50431 AC159624.1-201ENSMUST00000217762 1344 ntBASIC8.06□□□□□ -1.12
Shmt1P50431 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Shmt1P50431 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC8.06□□□□□ -1.12
Shmt1P50431 Hsf2bp-201ENSMUST00000002145 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Shmt1P50431 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Shmt1P50431 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Shmt1P50431 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC8.06□□□□□ -1.12
Shmt1P50431 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Shmt1P50431 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC8.06□□□□□ -1.12
Shmt1P50431 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Shmt1P50431 Gm28469-201ENSMUST00000186374 2166 ntTSL 5 BASIC8.06□□□□□ -1.12
Shmt1P50431 Gm28134-201ENSMUST00000188690 2166 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Shmt1P50431 Gm37075-201ENSMUST00000191888 2166 ntTSL 5 BASIC8.06□□□□□ -1.12
Shmt1P50431 Gm37574-201ENSMUST00000194264 2166 ntTSL 5 BASIC8.06□□□□□ -1.12
Shmt1P50431 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC8.06□□□□□ -1.12
Shmt1P50431 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Shmt1P50431 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
Shmt1P50431 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC8.06□□□□□ -1.12
Shmt1P50431 Gm5759-201ENSMUST00000119203 811 ntBASIC8.06□□□□□ -1.12
Shmt1P50431 Gm15061-201ENSMUST00000121076 1046 ntBASIC8.06□□□□□ -1.12
Shmt1P50431 Gm25843-201ENSMUST00000122582 314 ntBASIC8.06□□□□□ -1.12
Shmt1P50431 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC8.06□□□□□ -1.12
Shmt1P50431 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC8.06□□□□□ -1.12
Shmt1P50431 Gm22588-201ENSMUST00000157510 140 ntBASIC8.06□□□□□ -1.12
Shmt1P50431 Gm6047-201ENSMUST00000167221 574 ntBASIC8.06□□□□□ -1.12
Shmt1P50431 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC8.06□□□□□ -1.12
Shmt1P50431 Gm18254-201ENSMUST00000185699 1204 ntBASIC8.06□□□□□ -1.12
Shmt1P50431 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC8.06□□□□□ -1.12
Shmt1P50431 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Shmt1P50431 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC8.06□□□□□ -1.12
Shmt1P50431 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC8.06□□□□□ -1.12
Shmt1P50431 Gm5723-201ENSMUST00000203096 432 ntBASIC8.06□□□□□ -1.12
Shmt1P50431 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC8.06□□□□□ -1.12
Shmt1P50431 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Shmt1P50431 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC8.06□□□□□ -1.12
Shmt1P50431 Gm19540-201ENSMUST00000221843 810 ntBASIC8.06□□□□□ -1.12
Shmt1P50431 AC118249.1-201ENSMUST00000224822 608 ntBASIC8.06□□□□□ -1.12
Shmt1P50431 Cthrc1-204ENSMUST00000226433 596 ntBASIC8.06□□□□□ -1.12
Shmt1P50431 AC166822.1-201ENSMUST00000227667 636 ntBASIC8.06□□□□□ -1.12
Shmt1P50431 AC154730.1-201ENSMUST00000227874 816 ntBASIC8.06□□□□□ -1.12
Shmt1P50431 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Shmt1P50431 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Shmt1P50431 AC154347.1-201ENSMUST00000221358 3105 ntBASIC8.06□□□□□ -1.12
Shmt1P50431 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Shmt1P50431 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Shmt1P50431 Gm37426-201ENSMUST00000195241 2470 ntBASIC8.06□□□□□ -1.12
Shmt1P50431 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
Shmt1P50431 Gm44165-201ENSMUST00000203093 1469 ntBASIC8.06□□□□□ -1.12
Shmt1P50431 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Shmt1P50431 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Shmt1P50431 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Shmt1P50431 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Shmt1P50431 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Shmt1P50431 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Shmt1P50431 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Shmt1P50431 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Shmt1P50431 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Shmt1P50431 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Shmt1P50431 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Shmt1P50431 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Shmt1P50431 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Shmt1P50431 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC8.05□□□□□ -1.12
Shmt1P50431 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Shmt1P50431 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Shmt1P50431 AC154828.1-201ENSMUST00000220696 2810 ntBASIC8.05□□□□□ -1.12
Shmt1P50431 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Shmt1P50431 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Shmt1P50431 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Shmt1P50431 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Shmt1P50431 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Shmt1P50431 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Shmt1P50431 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC8.05□□□□□ -1.12
Shmt1P50431 Gm13487-201ENSMUST00000122240 864 ntBASIC8.05□□□□□ -1.12
Shmt1P50431 Gm25780-201ENSMUST00000122528 253 ntBASIC8.05□□□□□ -1.12
Shmt1P50431 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC8.05□□□□□ -1.12
Shmt1P50431 Gm16276-201ENSMUST00000131218 262 ntBASIC8.05□□□□□ -1.12
Shmt1P50431 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Shmt1P50431 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC8.05□□□□□ -1.12
Shmt1P50431 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC8.05□□□□□ -1.12
Shmt1P50431 Gm6921-201ENSMUST00000161478 435 ntBASIC8.05□□□□□ -1.12
Shmt1P50431 Gm24923-201ENSMUST00000178201 88 ntBASIC8.05□□□□□ -1.12
Shmt1P50431 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
Shmt1P50431 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC8.05□□□□□ -1.12
Shmt1P50431 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Shmt1P50431 Gm8489-201ENSMUST00000209876 1152 ntBASIC8.05□□□□□ -1.12
Shmt1P50431 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC8.05□□□□□ -1.12
Shmt1P50431 Gm9118-201ENSMUST00000219246 754 ntBASIC8.05□□□□□ -1.12
Shmt1P50431 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC8.05□□□□□ -1.12
Shmt1P50431 AC069562.1-201ENSMUST00000224206 434 ntBASIC8.05□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms