Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Ryr1-201ENSMUST00000032813 15352 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Sema5a-201ENSMUST00000067458 10809 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Gm37953-201ENSMUST00000195293 1884 ntBASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Havcr1-201ENSMUST00000047568 1892 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Pappa2-202ENSMUST00000159861 9518 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Prps2-201ENSMUST00000026839 3699 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Bcas3-204ENSMUST00000108056 2925 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Cks1brt-202ENSMUST00000211617 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Gm13156-201ENSMUST00000118348 321 ntBASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Gm13130-201ENSMUST00000119195 1166 ntBASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Gm14826-201ENSMUST00000121284 901 ntBASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Gm15538-201ENSMUST00000121410 313 ntBASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Gm22642-201ENSMUST00000175352 252 ntBASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Mir6921-201ENSMUST00000183719 80 ntBASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Gm4972-201ENSMUST00000211108 1254 ntBASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 1700018P08Rik-201ENSMUST00000212522 1239 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Gm18655-201ENSMUST00000214802 1090 ntBASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 AC127224.1-201ENSMUST00000218094 453 ntBASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 AC192091.1-201ENSMUST00000218668 439 ntBASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Gm35638-201ENSMUST00000220724 652 ntBASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 AC123920.1-201ENSMUST00000221449 384 ntBASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 n-R5s29-201ENSMUST00000082836 119 ntBASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Synj1-210ENSMUST00000170853 7012 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Scfd2-201ENSMUST00000072857 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Olfr943-202ENSMUST00000213176 8275 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Kbtbd3-201ENSMUST00000049648 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Itpr1-201ENSMUST00000032192 9870 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Cdh23-203ENSMUST00000105462 10592 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Bank1-203ENSMUST00000196159 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Gm38288-201ENSMUST00000195330 1320 ntBASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Gm38200-201ENSMUST00000192083 2111 ntBASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Dab1-201ENSMUST00000106826 996 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Gm7821-201ENSMUST00000117111 788 ntBASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Gm6743-201ENSMUST00000117345 1066 ntBASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Gm13243-201ENSMUST00000117481 565 ntBASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Gm12104-201ENSMUST00000120359 979 ntBASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Gm26025-201ENSMUST00000158655 271 ntBASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Gm6558-202ENSMUST00000192046 180 ntTSL 5 BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Gm37841-201ENSMUST00000195367 376 ntBASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Gm34583-203ENSMUST00000202586 454 ntBASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Gm8575-201ENSMUST00000210262 521 ntBASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Gm17611-202ENSMUST00000220613 814 ntBASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Ghitm-202ENSMUST00000165649 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Gm9256-201ENSMUST00000198106 1420 ntBASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Sulf1-205ENSMUST00000186051 4563 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Pex5l-210ENSMUST00000193681 3620 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Nsun6-204ENSMUST00000114715 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Acpp-202ENSMUST00000112590 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Gm37960-201ENSMUST00000192402 1897 ntBASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Olfr632-203ENSMUST00000214711 3282 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Sipa1l1-208ENSMUST00000222298 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Gm7265-201ENSMUST00000192735 3502 ntBASIC8.59□□□□□ -1.03
B020004C17RikJ3QP07 Baz2a-208ENSMUST00000220049 8443 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms