Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm6074-201ENSMUST00000193340 451 ntBASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Gm4860-201ENSMUST00000200368 454 ntBASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Gm38302-201ENSMUST00000191676 2076 ntBASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Gm31152-201ENSMUST00000210319 2171 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Phc2-203ENSMUST00000106080 3885 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Nod2-202ENSMUST00000109634 4666 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 5430420F09Rik-201ENSMUST00000194956 1799 ntBASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Sycp1-201ENSMUST00000029448 3437 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col4a6B1AVK5 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 A530041M06Rik-201ENSMUST00000199690 2288 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 AU020206-202ENSMUST00000206358 3009 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 BC025920-201ENSMUST00000099442 2785 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Klf5-202ENSMUST00000226784 2852 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm8662-201ENSMUST00000118644 574 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm11257-201ENSMUST00000121313 315 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm14612-201ENSMUST00000121522 881 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm7613-201ENSMUST00000139070 487 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm412-201ENSMUST00000193360 948 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm42708-201ENSMUST00000196332 905 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Ass-ps1-201ENSMUST00000197717 761 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm45485-201ENSMUST00000211229 357 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm45497-201ENSMUST00000211701 740 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 AC152922.1-201ENSMUST00000216518 1232 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm29486-201ENSMUST00000088648 372 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm43411-201ENSMUST00000196235 1579 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Osbpl6-203ENSMUST00000111930 3853 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Akap1-202ENSMUST00000107903 3721 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm44503-201ENSMUST00000149692 4383 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Nos1-207ENSMUST00000171055 4388 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Synj2-208ENSMUST00000115789 5130 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Adgrf4-204ENSMUST00000170723 2751 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm20731-201ENSMUST00000193462 2288 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm28839-201ENSMUST00000189579 2171 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Olfr56-206ENSMUST00000203810 1990 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Olfr1360-202ENSMUST00000205788 1988 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 CT573019.1-201ENSMUST00000227762 1689 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm5454-201ENSMUST00000052030 1453 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm9439-201ENSMUST00000119554 973 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm25780-201ENSMUST00000122528 253 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm9359-201ENSMUST00000163721 1221 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm17212-201ENSMUST00000166666 259 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm27804-201ENSMUST00000185135 119 ntBASIC7.67□□□□□ -1.18
Col4a6B1AVK5 Gm43656-201ENSMUST00000197882 434 ntBASIC7.67□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms