Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Use1Q9CQ56 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Use1Q9CQ56 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Gm7842-201ENSMUST00000217691 1379 ntBASIC7.11□□□□□ -1.27
Use1Q9CQ56 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Gc-201ENSMUST00000049209 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Gm22934-201ENSMUST00000103961 132 ntBASIC7.11□□□□□ -1.27
Use1Q9CQ56 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Gm11907-201ENSMUST00000118918 1007 ntBASIC7.11□□□□□ -1.27
Use1Q9CQ56 Gm11901-201ENSMUST00000120412 437 ntBASIC7.11□□□□□ -1.27
Use1Q9CQ56 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Krr1-204ENSMUST00000174653 972 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Mir6912-201ENSMUST00000184456 70 ntBASIC7.11□□□□□ -1.27
Use1Q9CQ56 Gm28645-201ENSMUST00000185859 564 ntBASIC7.11□□□□□ -1.27
Use1Q9CQ56 4930449E01Rik-202ENSMUST00000188698 532 ntTSL 3 BASIC7.11□□□□□ -1.27
Use1Q9CQ56 D7Ertd128e-201ENSMUST00000189744 928 ntTSL 2 BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Gm4275-203ENSMUST00000210214 1298 ntTSL 5 BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC7.11□□□□□ -1.27
Use1Q9CQ56 AC116487.1-201ENSMUST00000227033 339 ntBASIC7.11□□□□□ -1.27
Use1Q9CQ56 AC154760.1-201ENSMUST00000227218 673 ntBASIC7.11□□□□□ -1.27
Use1Q9CQ56 Glycam1-201ENSMUST00000023134 628 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Glipr1-201ENSMUST00000074805 1081 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Olfr155-201ENSMUST00000095108 1172 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC7.11□□□□□ -1.27
Use1Q9CQ56 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC7.11□□□□□ -1.27
Use1Q9CQ56 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Use1Q9CQ56 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Use1Q9CQ56 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Use1Q9CQ56 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Use1Q9CQ56 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Use1Q9CQ56 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Use1Q9CQ56 Gm42763-201ENSMUST00000199595 2087 ntBASIC7.1□□□□□ -1.27
Use1Q9CQ56 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Use1Q9CQ56 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Use1Q9CQ56 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC7.1□□□□□ -1.27
Use1Q9CQ56 AC105407.2-205ENSMUST00000224680 2733 ntBASIC7.1□□□□□ -1.27
Use1Q9CQ56 Gm37790-201ENSMUST00000193136 3346 ntBASIC7.1□□□□□ -1.27
Use1Q9CQ56 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC7.1□□□□□ -1.27
Use1Q9CQ56 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Use1Q9CQ56 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Use1Q9CQ56 Gm11416-201ENSMUST00000119111 863 ntBASIC7.1□□□□□ -1.27
Use1Q9CQ56 Gm6292-201ENSMUST00000120712 1095 ntBASIC7.1□□□□□ -1.27
Use1Q9CQ56 Gm5931-201ENSMUST00000121308 477 ntBASIC7.1□□□□□ -1.27
Use1Q9CQ56 Gm12634-201ENSMUST00000122157 992 ntBASIC7.1□□□□□ -1.27
Use1Q9CQ56 Gm40614-201ENSMUST00000125161 1254 ntTSL 5 BASIC7.1□□□□□ -1.27
Use1Q9CQ56 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC7.1□□□□□ -1.27
Use1Q9CQ56 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Use1Q9CQ56 Dtx3-205ENSMUST00000137151 346 ntTSL 3 BASIC7.1□□□□□ -1.27
Use1Q9CQ56 Gm13269-201ENSMUST00000143458 655 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Use1Q9CQ56 1700034H15Rik-205ENSMUST00000154116 926 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Use1Q9CQ56 Gm14715-201ENSMUST00000156823 643 ntTSL 3 BASIC7.1□□□□□ -1.27
Use1Q9CQ56 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC7.1□□□□□ -1.27
Use1Q9CQ56 Gm26436-201ENSMUST00000180325 132 ntBASIC7.1□□□□□ -1.27
Use1Q9CQ56 Gm9423-201ENSMUST00000183173 997 ntBASIC7.1□□□□□ -1.27
Use1Q9CQ56 Gm28677-202ENSMUST00000186904 615 ntBASIC7.1□□□□□ -1.27
Use1Q9CQ56 Gm8307-201ENSMUST00000187682 1150 ntBASIC7.1□□□□□ -1.27
Use1Q9CQ56 Gm37247-201ENSMUST00000192549 730 ntBASIC7.1□□□□□ -1.27
Use1Q9CQ56 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC7.1□□□□□ -1.27
Use1Q9CQ56 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC7.1□□□□□ -1.27
Use1Q9CQ56 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC7.1□□□□□ -1.27
Use1Q9CQ56 AC154307.1-201ENSMUST00000214799 90 ntBASIC7.1□□□□□ -1.27
Use1Q9CQ56 Gm4977-201ENSMUST00000215709 1262 ntBASIC7.1□□□□□ -1.27
Use1Q9CQ56 AC132384.10-201ENSMUST00000217862 1204 ntBASIC7.1□□□□□ -1.27
Use1Q9CQ56 Gm34574-202ENSMUST00000219433 1108 ntTSL 5 BASIC7.1□□□□□ -1.27
Use1Q9CQ56 Gm35412-201ENSMUST00000220437 999 ntBASIC7.1□□□□□ -1.27
Use1Q9CQ56 Cacna2d3-208ENSMUST00000225985 918 ntBASIC7.1□□□□□ -1.27
Use1Q9CQ56 Asb12-201ENSMUST00000033549 1258 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Use1Q9CQ56 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC7.1□□□□□ -1.27
Use1Q9CQ56 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Use1Q9CQ56 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Use1Q9CQ56 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Use1Q9CQ56 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Use1Q9CQ56 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC7.1□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms