Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm5402-201ENSMUST00000119588 1618 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm22661-201ENSMUST00000104192 132 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm14579-201ENSMUST00000117068 283 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm11510-201ENSMUST00000120278 347 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm16147-201ENSMUST00000162143 373 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm7031-201ENSMUST00000173709 919 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm13147-202ENSMUST00000177526 1173 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Mir6239-201ENSMUST00000183564 105 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Mir6922-201ENSMUST00000185099 66 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm8307-201ENSMUST00000187682 1150 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm36961-201ENSMUST00000191980 132 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm6119-201ENSMUST00000193443 1206 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm37576-201ENSMUST00000194228 372 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm7343-201ENSMUST00000194510 1061 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm42977-201ENSMUST00000197497 144 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm27680-202ENSMUST00000199221 807 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm18290-201ENSMUST00000202900 844 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm43867-201ENSMUST00000203860 525 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm44061-201ENSMUST00000203962 1195 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm30504-203ENSMUST00000209762 1048 ntTSL 5 BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm45454-201ENSMUST00000211484 455 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm45712-201ENSMUST00000212417 335 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 AC167202.1-201ENSMUST00000219027 331 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC7.31□□□□□ -1.24
Clrn1Q8K445 AC154562.1-201ENSMUST00000226140 966 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 CT025525.2-201ENSMUST00000227743 423 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 AC164883.2-201ENSMUST00000227931 3815 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm4953-201ENSMUST00000077309 483 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm22748-201ENSMUST00000082493 136 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm10805-201ENSMUST00000099710 399 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Gm7134-201ENSMUST00000122296 2406 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Khdc1a-201ENSMUST00000088407 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Phf7-206ENSMUST00000228437 1373 ntBASIC7.31□□□□□ -1.24
Clrn1Q8K445 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm43623-201ENSMUST00000199289 2663 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Vmn2r40-201ENSMUST00000171942 3623 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Vipas39-201ENSMUST00000021426 2509 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms