Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 n-R5s9-201ENSMUST00000104432 117 ntBASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Gm24986-201ENSMUST00000104452 132 ntBASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Gm13649-201ENSMUST00000122325 606 ntBASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Gm22885-201ENSMUST00000157410 107 ntBASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Scarna17-201ENSMUST00000158064 79 ntBASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Gm22424-201ENSMUST00000158527 87 ntBASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Gm20797-201ENSMUST00000177894 383 ntBASIC8.92□□□□□ -0.98
Vps53Q8CCB4 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Mir7230-201ENSMUST00000195977 56 ntBASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Olfr471-201ENSMUST00000210091 936 ntBASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Olfr472-202ENSMUST00000210420 1083 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 AC131029.2-203ENSMUST00000228116 1244 ntBASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Gm28497-201ENSMUST00000189646 3029 ntBASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Gm37483-201ENSMUST00000194382 1484 ntBASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Gm23706-201ENSMUST00000104369 82 ntBASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Gm11922-201ENSMUST00000118967 475 ntBASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Gm12687-201ENSMUST00000119752 706 ntBASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Gm14465-201ENSMUST00000120603 567 ntBASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Gm11383-201ENSMUST00000121346 807 ntBASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Gm16103-201ENSMUST00000163003 1279 ntBASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Traj54-201ENSMUST00000165071 54 ntBASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Gm6489-201ENSMUST00000178167 696 ntBASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Gm8167-201ENSMUST00000183320 958 ntBASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Mir8095-201ENSMUST00000185103 129 ntBASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Gm6799-201ENSMUST00000186919 573 ntBASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Gm4545-201ENSMUST00000190797 603 ntBASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Gm37729-201ENSMUST00000194761 1172 ntBASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Gm3103-201ENSMUST00000198073 752 ntBASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Gm44892-201ENSMUST00000208595 488 ntBASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Gm19092-201ENSMUST00000209036 969 ntBASIC8.91□□□□□ -0.98
Vps53Q8CCB4 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC8.91□□□□□ -0.98
Vps53Q8CCB4 CT009713.5-201ENSMUST00000224508 909 ntBASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Gm44550-201ENSMUST00000207311 2058 ntBASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Vps53Q8CCB4 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Vps53Q8CCB4 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms