Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Gm38251-201ENSMUST00000192968 2575 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Zfp961-201ENSMUST00000109997 2713 ntAPPRIS P2 TSL 2 BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Wee2-201ENSMUST00000038907 2884 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Gm45139-201ENSMUST00000206543 2057 ntBASIC6.53□□□□□ -1.36
Rif1Q6PR54 Stat1-212ENSMUST00000191435 2803 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Gimap8-203ENSMUST00000203509 3138 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Dcx-202ENSMUST00000087313 3120 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Baz2a-202ENSMUST00000170054 8372 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Baz2a-201ENSMUST00000045621 8369 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.36
Rif1Q6PR54 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Rif1Q6PR54 Gm3076-201ENSMUST00000161613 451 ntBASIC6.52□□□□□ -1.36
Rif1Q6PR54 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
Rif1Q6PR54 Gm15257-201ENSMUST00000177680 883 ntBASIC6.52□□□□□ -1.36
Rif1Q6PR54 Gm15252-201ENSMUST00000177750 883 ntBASIC6.52□□□□□ -1.36
Rif1Q6PR54 Gm15256-201ENSMUST00000177793 883 ntBASIC6.52□□□□□ -1.36
Rif1Q6PR54 Gm15260-201ENSMUST00000179402 883 ntBASIC6.52□□□□□ -1.36
Rif1Q6PR54 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC6.52□□□□□ -1.36
Rif1Q6PR54 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
Rif1Q6PR54 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Rif1Q6PR54 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.36
Rif1Q6PR54 Gm43542-201ENSMUST00000199505 379 ntBASIC6.52□□□□□ -1.36
Rif1Q6PR54 Gm36070-202ENSMUST00000200467 961 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Rif1Q6PR54 Gm18973-201ENSMUST00000205814 511 ntBASIC6.52□□□□□ -1.36
Rif1Q6PR54 Gm9357-201ENSMUST00000207138 805 ntBASIC6.52□□□□□ -1.36
Rif1Q6PR54 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC6.52□□□□□ -1.36
Rif1Q6PR54 5830408C22Rik-204ENSMUST00000211653 351 ntTSL 3 BASIC6.52□□□□□ -1.36
Rif1Q6PR54 Gm6869-201ENSMUST00000220334 734 ntBASIC6.52□□□□□ -1.36
Rif1Q6PR54 Cenpu-201ENSMUST00000034045 2931 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
Rif1Q6PR54 Gpbp1-201ENSMUST00000047627 3694 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.36
Rif1Q6PR54 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC6.52□□□□□ -1.36
Rif1Q6PR54 Csf3r-201ENSMUST00000030673 3160 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Psg19-201ENSMUST00000004657 2105 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Card6-201ENSMUST00000118365 5995 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Rif1Q6PR54 AC165148.1-201ENSMUST00000224795 2372 ntBASIC6.52□□□□□ -1.37
Rif1Q6PR54 Egf-209ENSMUST00000199615 3211 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Clcn3-205ENSMUST00000110302 3768 ntTSL 5 BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Tyms-201ENSMUST00000026846 3163 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Gm44639-201ENSMUST00000205859 3009 ntBASIC6.52□□□□□ -1.37
Rif1Q6PR54 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Vsig1-201ENSMUST00000033806 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Gm44228-201ENSMUST00000204888 2026 ntBASIC6.52□□□□□ -1.37
Rif1Q6PR54 Dhrs7b-202ENSMUST00000108718 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Rif1Q6PR54 F630040K05Rik-201ENSMUST00000180519 2841 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Gm15574-201ENSMUST00000119937 405 ntBASIC6.52□□□□□ -1.37
Rif1Q6PR54 Gm12967-201ENSMUST00000122147 289 ntBASIC6.52□□□□□ -1.37
Rif1Q6PR54 Gm9428-201ENSMUST00000127214 769 ntBASIC6.52□□□□□ -1.37
Rif1Q6PR54 Prr13-202ENSMUST00000164688 1020 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Gm29362-201ENSMUST00000187898 133 ntBASIC6.52□□□□□ -1.37
Rif1Q6PR54 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC6.52□□□□□ -1.37
Rif1Q6PR54 AC132304.1-201ENSMUST00000218860 135 ntBASIC6.52□□□□□ -1.37
Rif1Q6PR54 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Gm4012-201ENSMUST00000221504 581 ntBASIC6.52□□□□□ -1.37
Rif1Q6PR54 Gm40598-201ENSMUST00000222953 547 ntBASIC6.52□□□□□ -1.37
Rif1Q6PR54 AC172989.1-201ENSMUST00000226387 513 ntBASIC6.52□□□□□ -1.37
Rif1Q6PR54 AC137871.3-201ENSMUST00000226628 225 ntBASIC6.52□□□□□ -1.37
Rif1Q6PR54 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Rif1Q6PR54 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Cd101-202ENSMUST00000167086 3223 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Gm43143-201ENSMUST00000196083 2023 ntBASIC6.52□□□□□ -1.37
Rif1Q6PR54 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Lmod1-201ENSMUST00000059352 3948 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Nup188-201ENSMUST00000064447 5710 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Gm37843-201ENSMUST00000195213 2639 ntBASIC6.52□□□□□ -1.37
Rif1Q6PR54 Trim43a-201ENSMUST00000164661 1981 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Gm12743-201ENSMUST00000126668 3700 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rif1Q6PR54 Prom1-202ENSMUST00000074113 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Rif1Q6PR54 n-R5s1-201ENSMUST00000101925 119 ntBASIC6.51□□□□□ -1.37
Rif1Q6PR54 Gm12439-201ENSMUST00000117162 365 ntBASIC6.51□□□□□ -1.37
Rif1Q6PR54 Gm13552-201ENSMUST00000118837 417 ntBASIC6.51□□□□□ -1.37
Rif1Q6PR54 Gm12477-201ENSMUST00000121221 571 ntBASIC6.51□□□□□ -1.37
Rif1Q6PR54 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC6.51□□□□□ -1.37
Rif1Q6PR54 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC6.51□□□□□ -1.37
Rif1Q6PR54 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
Rif1Q6PR54 Gm25692-201ENSMUST00000175444 125 ntBASIC6.51□□□□□ -1.37
Rif1Q6PR54 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC6.51□□□□□ -1.37
Rif1Q6PR54 Pea15b-201ENSMUST00000182806 387 ntBASIC6.51□□□□□ -1.37
Rif1Q6PR54 Gm27998-201ENSMUST00000184902 361 ntBASIC6.51□□□□□ -1.37
Rif1Q6PR54 Igkv12-67-201ENSMUST00000197806 354 ntBASIC6.51□□□□□ -1.37
Rif1Q6PR54 AC099934.1-201ENSMUST00000200493 79 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms