Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Hrh2-201ENSMUST00000038101 2789 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Msh6P54276 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Msh6P54276 Nrp2-205ENSMUST00000114155 6534 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Msh6P54276 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC9.61□□□□□ -0.87
Msh6P54276 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Msh6P54276 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Msh6P54276 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Msh6P54276 Gm38359-201ENSMUST00000191884 2225 ntBASIC9.61□□□□□ -0.87
Msh6P54276 Prox2-202ENSMUST00000177289 3066 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Msh6P54276 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Msh6P54276 Cdhr1-201ENSMUST00000022337 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Msh6P54276 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Msh6P54276 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Msh6P54276 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Msh6P54276 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Msh6P54276 Gm7694-201ENSMUST00000179801 3827 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Msh6P54276 Drp2-206ENSMUST00000153424 7135 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Msh6P54276 Dclk1-212ENSMUST00000199585 5196 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Msh6P54276 Eya3-213ENSMUST00000180250 5020 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Msh6P54276 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Msh6P54276 Gm6284-201ENSMUST00000209609 4287 ntBASIC9.61□□□□□ -0.87
Msh6P54276 Ccdc14-201ENSMUST00000023532 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Msh6P54276 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Msh6P54276 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Msh6P54276 Gm14826-201ENSMUST00000121284 901 ntBASIC9.61□□□□□ -0.87
Msh6P54276 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Msh6P54276 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Msh6P54276 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC9.61□□□□□ -0.87
Msh6P54276 Gm3585-201ENSMUST00000173438 875 ntBASIC9.61□□□□□ -0.87
Msh6P54276 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Msh6P54276 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Msh6P54276 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Msh6P54276 AC154382.1-201ENSMUST00000220958 1282 ntBASIC9.61□□□□□ -0.87
Msh6P54276 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Msh6P54276 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Msh6P54276 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Msh6P54276 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Msh6P54276 Fam198b-201ENSMUST00000029567 6627 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Msh6P54276 Rab43-201ENSMUST00000032134 4308 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Msh6P54276 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Msh6P54276 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Msh6P54276 Gm43430-201ENSMUST00000196513 3897 ntBASIC9.6□□□□□ -0.87
Msh6P54276 Pde7b-201ENSMUST00000020165 4137 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Msh6P54276 Ttc28-201ENSMUST00000040111 10780 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Msh6P54276 AC091783.1-201ENSMUST00000223614 1613 ntBASIC9.6□□□□□ -0.87
Msh6P54276 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Msh6P54276 Meis1-201ENSMUST00000068264 3196 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Msh6P54276 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Msh6P54276 Tma16-201ENSMUST00000026681 4328 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Msh6P54276 Tirap-201ENSMUST00000175765 4589 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Msh6P54276 Fam168a-202ENSMUST00000107042 6388 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Msh6P54276 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Msh6P54276 Cyfip2-202ENSMUST00000093166 6298 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Msh6P54276 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Msh6P54276 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Msh6P54276 Dgkh-206ENSMUST00000228362 3308 ntBASIC9.6□□□□□ -0.87
Msh6P54276 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Msh6P54276 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Msh6P54276 Rapgef5-206ENSMUST00000222185 5508 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Msh6P54276 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Msh6P54276 Kantr-207ENSMUST00000195280 4212 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Msh6P54276 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC9.6□□□□□ -0.87
Msh6P54276 Gm12929-201ENSMUST00000122406 370 ntBASIC9.6□□□□□ -0.87
Msh6P54276 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC9.6□□□□□ -0.87
Msh6P54276 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Msh6P54276 Gm22642-201ENSMUST00000175352 252 ntBASIC9.6□□□□□ -0.87
Msh6P54276 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC9.6□□□□□ -0.87
Msh6P54276 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC9.6□□□□□ -0.87
Msh6P54276 Gm7341-201ENSMUST00000192183 926 ntBASIC9.6□□□□□ -0.87
Msh6P54276 Gm44258-201ENSMUST00000204925 301 ntBASIC9.6□□□□□ -0.87
Msh6P54276 Gm44279-201ENSMUST00000205154 472 ntBASIC9.6□□□□□ -0.87
Msh6P54276 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC9.6□□□□□ -0.87
Msh6P54276 Gm18655-201ENSMUST00000214802 1090 ntBASIC9.6□□□□□ -0.87
Msh6P54276 AC174678.3-201ENSMUST00000227568 362 ntBASIC9.6□□□□□ -0.87
Msh6P54276 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Msh6P54276 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC9.6□□□□□ -0.87
Msh6P54276 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC9.6□□□□□ -0.87
Msh6P54276 Pogk-203ENSMUST00000131487 8692 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Msh6P54276 Glod4-206ENSMUST00000169701 4203 ntTSL 2 BASIC9.6□□□□□ -0.87
Msh6P54276 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Msh6P54276 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Msh6P54276 Acaca-201ENSMUST00000020843 9026 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Msh6P54276 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Msh6P54276 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC9.59□□□□□ -0.87
Msh6P54276 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Msh6P54276 CT010505.3-201ENSMUST00000227835 1651 ntBASIC9.59□□□□□ -0.87
Msh6P54276 Igsf9b-204ENSMUST00000214357 16144 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Msh6P54276 Gm38300-201ENSMUST00000194245 1870 ntBASIC9.59□□□□□ -0.87
Msh6P54276 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Msh6P54276 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Msh6P54276 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC9.59□□□□□ -0.87
Msh6P54276 Gm10623-201ENSMUST00000209081 2639 ntBASIC9.59□□□□□ -0.87
Msh6P54276 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Msh6P54276 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Msh6P54276 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC9.59□□□□□ -0.87
Msh6P54276 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
Msh6P54276 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Msh6P54276 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Msh6P54276 Gm13423-201ENSMUST00000117205 888 ntBASIC9.59□□□□□ -0.87
Msh6P54276 Gm15763-201ENSMUST00000120136 403 ntBASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms