Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Cpne8-202ENSMUST00000064391 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Mss51-201ENSMUST00000022353 1826 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 L3mbtl2-201ENSMUST00000023029 3487 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Pik3cg-202ENSMUST00000085469 4584 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 St3gal6-201ENSMUST00000114357 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Sox5-205ENSMUST00000111749 3879 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Eif2d-201ENSMUST00000068791 3316 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Scrn3-201ENSMUST00000090811 3309 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Gm37198-201ENSMUST00000195593 2110 ntBASIC8.3□□□□□ -1.08
Sox1P53783 AC121860.1-201ENSMUST00000227908 2787 ntBASIC8.3□□□□□ -1.08
Sox1P53783 Numb-204ENSMUST00000117217 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Pla2g16-201ENSMUST00000025925 3523 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Ep400-204ENSMUST00000112436 10685 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Ptafr-201ENSMUST00000070690 3637 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Smok3c-201ENSMUST00000110967 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Bbs7-202ENSMUST00000108155 2437 ntTSL 5 BASIC8.3□□□□□ -1.08
Sox1P53783 AC102431.2-201ENSMUST00000224071 2448 ntBASIC8.3□□□□□ -1.08
Sox1P53783 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Sox1P53783 CT025618.1-202ENSMUST00000226439 1758 ntBASIC8.3□□□□□ -1.08
Sox1P53783 Rad51b-201ENSMUST00000079533 1759 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Vmn1r193-203ENSMUST00000227562 6840 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Sox1P53783 Ap3s2-201ENSMUST00000075657 5813 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Tmem108-201ENSMUST00000049452 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Slc37a2-202ENSMUST00000161114 2945 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Cblb-206ENSMUST00000227879 3866 ntAPPRIS ALT2 BASIC8.29□□□□□ -1.08
Sox1P53783 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC8.29□□□□□ -1.08
Sox1P53783 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC8.29□□□□□ -1.08
Sox1P53783 Mefv-201ENSMUST00000023180 3126 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 Eif2ak4-202ENSMUST00000102527 4906 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 Cdh26-201ENSMUST00000042092 2891 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 Cttnbp2-201ENSMUST00000090601 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 4930433I11Rik-202ENSMUST00000206529 2963 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Sox1P53783 Epn2-212ENSMUST00000178202 4317 ntAPPRIS P3 TSL 5 BASIC8.29□□□□□ -1.08
Sox1P53783 Zfp229-201ENSMUST00000065871 4525 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Sox1P53783 Eya3-213ENSMUST00000180250 5020 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Sox1P53783 Tifab-202ENSMUST00000225063 2718 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Sox1P53783 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 Prpf31-201ENSMUST00000008517 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 Col19a1-201ENSMUST00000051344 3336 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Sox1P53783 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Sox1P53783 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Sox1P53783 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Sox1P53783 Gm14863-201ENSMUST00000119648 307 ntBASIC8.29□□□□□ -1.08
Sox1P53783 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Sox1P53783 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Sox1P53783 Gm12804-201ENSMUST00000121030 999 ntBASIC8.29□□□□□ -1.08
Sox1P53783 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC8.29□□□□□ -1.08
Sox1P53783 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 Gm25271-201ENSMUST00000157273 290 ntBASIC8.29□□□□□ -1.08
Sox1P53783 Scarna17-201ENSMUST00000158064 79 ntBASIC8.29□□□□□ -1.08
Sox1P53783 Gm8164-201ENSMUST00000169120 1192 ntBASIC8.29□□□□□ -1.08
Sox1P53783 Mir5110-201ENSMUST00000175537 87 ntBASIC8.29□□□□□ -1.08
Sox1P53783 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC8.29□□□□□ -1.08
Sox1P53783 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC8.29□□□□□ -1.08
Sox1P53783 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC8.29□□□□□ -1.08
Sox1P53783 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Sox1P53783 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC8.29□□□□□ -1.08
Sox1P53783 Gm8357-201ENSMUST00000181115 1011 ntBASIC8.29□□□□□ -1.08
Sox1P53783 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 Gm18356-201ENSMUST00000185677 623 ntBASIC8.29□□□□□ -1.08
Sox1P53783 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Sox1P53783 Ighv1-14-201ENSMUST00000194015 402 ntBASIC8.29□□□□□ -1.08
Sox1P53783 Gm5309-201ENSMUST00000197416 677 ntBASIC8.29□□□□□ -1.08
Sox1P53783 Ass-ps1-201ENSMUST00000197717 761 ntBASIC8.29□□□□□ -1.08
Sox1P53783 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC8.29□□□□□ -1.08
Sox1P53783 Gm17834-201ENSMUST00000204322 891 ntBASIC8.29□□□□□ -1.08
Sox1P53783 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Sox1P53783 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC8.29□□□□□ -1.08
Sox1P53783 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC8.29□□□□□ -1.08
Sox1P53783 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC8.29□□□□□ -1.08
Sox1P53783 AC117656.3-205ENSMUST00000224606 1205 ntBASIC8.29□□□□□ -1.08
Sox1P53783 AC154249.1-201ENSMUST00000226296 320 ntBASIC8.29□□□□□ -1.08
Sox1P53783 AC159267.1-201ENSMUST00000226702 678 ntBASIC8.29□□□□□ -1.08
Sox1P53783 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC8.29□□□□□ -1.08
Sox1P53783 Vmn1r41-205ENSMUST00000227630 827 ntBASIC8.29□□□□□ -1.08
Sox1P53783 AC130673.2-201ENSMUST00000228091 797 ntBASIC8.29□□□□□ -1.08
Sox1P53783 Sbp-201ENSMUST00000024940 833 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 Slurp2-201ENSMUST00000057932 545 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Sox1P53783 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Sox1P53783 Apobec4-201ENSMUST00000068875 1566 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 Mro-201ENSMUST00000119239 1772 ntAPPRIS P3 TSL 5 BASIC8.29□□□□□ -1.08
Sox1P53783 AC158238.1-201ENSMUST00000216899 1965 ntBASIC8.29□□□□□ -1.08
Sox1P53783 4930555G01Rik-201ENSMUST00000112770 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 Gm3099-201ENSMUST00000112787 2065 ntAPPRIS P5 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 Apol11b-201ENSMUST00000166623 2057 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Sox1P53783 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 Oprl1-202ENSMUST00000108763 2971 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 Thbs3-201ENSMUST00000029682 3190 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 Ablim1-207ENSMUST00000111529 5927 ntTSL 5 BASIC8.29□□□□□ -1.08
Sox1P53783 Inpp5d-210ENSMUST00000169754 4937 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 Rab43-201ENSMUST00000032134 4308 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 Cul2-201ENSMUST00000025073 3727 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 9630001P10Rik-202ENSMUST00000181335 3006 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 Gm42897-201ENSMUST00000201486 2112 ntBASIC8.29□□□□□ -1.08
Sox1P53783 A330076C08Rik-202ENSMUST00000223513 1937 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms